Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cpne1Q8C166 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.77■□□□□ 0.6
Cpne1Q8C166 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cpne1Q8C166 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.77■□□□□ 0.6
Cpne1Q8C166 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cpne1Q8C166 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cpne1Q8C166 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cpne1Q8C166 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cpne1Q8C166 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.77■□□□□ 0.6
Cpne1Q8C166 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cpne1Q8C166 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cpne1Q8C166 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Cpne1Q8C166 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cpne1Q8C166 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Cpne1Q8C166 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cpne1Q8C166 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cpne1Q8C166 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cpne1Q8C166 Gm9847-201ENSMUST00000052528 599 ntBASIC18.76■□□□□ 0.59
Cpne1Q8C166 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cpne1Q8C166 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpne1Q8C166 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cpne1Q8C166 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpne1Q8C166 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpne1Q8C166 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpne1Q8C166 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Cpne1Q8C166 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpne1Q8C166 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpne1Q8C166 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cpne1Q8C166 Golgb1-201ENSMUST00000023534 498 ntBASIC18.75■□□□□ 0.59
Cpne1Q8C166 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpne1Q8C166 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpne1Q8C166 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpne1Q8C166 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cpne1Q8C166 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpne1Q8C166 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Cpne1Q8C166 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Cpne1Q8C166 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Cpne1Q8C166 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Cpne1Q8C166 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Cpne1Q8C166 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpne1Q8C166 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpne1Q8C166 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpne1Q8C166 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpne1Q8C166 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cpne1Q8C166 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpne1Q8C166 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpne1Q8C166 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cpne1Q8C166 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpne1Q8C166 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.74■□□□□ 0.59
Cpne1Q8C166 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpne1Q8C166 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cpne1Q8C166 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cpne1Q8C166 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Cpne1Q8C166 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cpne1Q8C166 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cpne1Q8C166 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.73■□□□□ 0.59
Cpne1Q8C166 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.73■□□□□ 0.59
Cpne1Q8C166 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.73■□□□□ 0.59
Cpne1Q8C166 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cpne1Q8C166 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cpne1Q8C166 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cpne1Q8C166 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cpne1Q8C166 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cpne1Q8C166 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.72■□□□□ 0.59
Cpne1Q8C166 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cpne1Q8C166 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Cpne1Q8C166 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cpne1Q8C166 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.72■□□□□ 0.59
Cpne1Q8C166 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cpne1Q8C166 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cpne1Q8C166 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Cpne1Q8C166 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cpne1Q8C166 Gm43530-201ENSMUST00000195920 274 ntBASIC18.71■□□□□ 0.59
Cpne1Q8C166 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cpne1Q8C166 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.71■□□□□ 0.59
Cpne1Q8C166 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpne1Q8C166 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Cpne1Q8C166 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cpne1Q8C166 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpne1Q8C166 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpne1Q8C166 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.7■□□□□ 0.58
Cpne1Q8C166 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpne1Q8C166 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpne1Q8C166 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpne1Q8C166 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Cpne1Q8C166 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpne1Q8C166 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpne1Q8C166 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpne1Q8C166 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cpne1Q8C166 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cpne1Q8C166 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpne1Q8C166 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpne1Q8C166 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cpne1Q8C166 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpne1Q8C166 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cpne1Q8C166 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpne1Q8C166 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpne1Q8C166 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpne1Q8C166 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cpne1Q8C166 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms