Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh3rf2Q8BZT2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh3rf2Q8BZT2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh3rf2Q8BZT2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.48■□□□□ 0.87
Sh3rf2Q8BZT2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh3rf2Q8BZT2 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Sh3rf2Q8BZT2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh3rf2Q8BZT2 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.48■□□□□ 0.87
Sh3rf2Q8BZT2 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sh3rf2Q8BZT2 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sh3rf2Q8BZT2 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sh3rf2Q8BZT2 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sh3rf2Q8BZT2 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Sh3rf2Q8BZT2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sh3rf2Q8BZT2 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Sh3rf2Q8BZT2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh3rf2Q8BZT2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sh3rf2Q8BZT2 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Sh3rf2Q8BZT2 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.46■□□□□ 0.87
Sh3rf2Q8BZT2 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh3rf2Q8BZT2 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh3rf2Q8BZT2 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Sh3rf2Q8BZT2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sh3rf2Q8BZT2 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sh3rf2Q8BZT2 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh3rf2Q8BZT2 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.46■□□□□ 0.87
Sh3rf2Q8BZT2 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh3rf2Q8BZT2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sh3rf2Q8BZT2 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sh3rf2Q8BZT2 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sh3rf2Q8BZT2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sh3rf2Q8BZT2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sh3rf2Q8BZT2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sh3rf2Q8BZT2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sh3rf2Q8BZT2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sh3rf2Q8BZT2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sh3rf2Q8BZT2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sh3rf2Q8BZT2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Sh3rf2Q8BZT2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sh3rf2Q8BZT2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sh3rf2Q8BZT2 Mir6236-201ENSMUST00000184437 123 ntBASIC20.44■□□□□ 0.86
Sh3rf2Q8BZT2 Gm43060-201ENSMUST00000200621 289 ntBASIC20.44■□□□□ 0.86
Sh3rf2Q8BZT2 Gm40848-201ENSMUST00000221998 324 ntBASIC20.44■□□□□ 0.86
Sh3rf2Q8BZT2 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Sh3rf2Q8BZT2 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sh3rf2Q8BZT2 Smad6-203ENSMUST00000179458 273 ntBASIC20.43■□□□□ 0.86
Sh3rf2Q8BZT2 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.43■□□□□ 0.86
Sh3rf2Q8BZT2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sh3rf2Q8BZT2 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.43■□□□□ 0.86
Sh3rf2Q8BZT2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sh3rf2Q8BZT2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sh3rf2Q8BZT2 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sh3rf2Q8BZT2 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.42■□□□□ 0.86
Sh3rf2Q8BZT2 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sh3rf2Q8BZT2 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Sh3rf2Q8BZT2 Gm5874-201ENSMUST00000096101 508 ntBASIC20.42■□□□□ 0.86
Sh3rf2Q8BZT2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sh3rf2Q8BZT2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.42■□□□□ 0.86
Sh3rf2Q8BZT2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Sh3rf2Q8BZT2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Sh3rf2Q8BZT2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sh3rf2Q8BZT2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sh3rf2Q8BZT2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sh3rf2Q8BZT2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sh3rf2Q8BZT2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Sh3rf2Q8BZT2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sh3rf2Q8BZT2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sh3rf2Q8BZT2 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sh3rf2Q8BZT2 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sh3rf2Q8BZT2 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.4■□□□□ 0.86
Sh3rf2Q8BZT2 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Sh3rf2Q8BZT2 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sh3rf2Q8BZT2 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.4■□□□□ 0.86
Sh3rf2Q8BZT2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sh3rf2Q8BZT2 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sh3rf2Q8BZT2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sh3rf2Q8BZT2 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sh3rf2Q8BZT2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Sh3rf2Q8BZT2 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Sh3rf2Q8BZT2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Sh3rf2Q8BZT2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Sh3rf2Q8BZT2 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sh3rf2Q8BZT2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sh3rf2Q8BZT2 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sh3rf2Q8BZT2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sh3rf2Q8BZT2 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.39■□□□□ 0.85
Sh3rf2Q8BZT2 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Sh3rf2Q8BZT2 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sh3rf2Q8BZT2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.38■□□□□ 0.85
Sh3rf2Q8BZT2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sh3rf2Q8BZT2 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Sh3rf2Q8BZT2 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Sh3rf2Q8BZT2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.38■□□□□ 0.85
Sh3rf2Q8BZT2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sh3rf2Q8BZT2 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Sh3rf2Q8BZT2 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Sh3rf2Q8BZT2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.38■□□□□ 0.85
Sh3rf2Q8BZT2 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sh3rf2Q8BZT2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.37■□□□□ 0.85
Sh3rf2Q8BZT2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms