Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp43Q8BUM9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Usp43Q8BUM9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp43Q8BUM9 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.44■□□□□ 0.86
Usp43Q8BUM9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Usp43Q8BUM9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.44■□□□□ 0.86
Usp43Q8BUM9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Usp43Q8BUM9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp43Q8BUM9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp43Q8BUM9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Usp43Q8BUM9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp43Q8BUM9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Usp43Q8BUM9 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp43Q8BUM9 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp43Q8BUM9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp43Q8BUM9 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp43Q8BUM9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp43Q8BUM9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Usp43Q8BUM9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp43Q8BUM9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Usp43Q8BUM9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp43Q8BUM9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp43Q8BUM9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp43Q8BUM9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp43Q8BUM9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp43Q8BUM9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp43Q8BUM9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Usp43Q8BUM9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp43Q8BUM9 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Usp43Q8BUM9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp43Q8BUM9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp43Q8BUM9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp43Q8BUM9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp43Q8BUM9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp43Q8BUM9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.41■□□□□ 0.86
Usp43Q8BUM9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp43Q8BUM9 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp43Q8BUM9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp43Q8BUM9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Usp43Q8BUM9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Usp43Q8BUM9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp43Q8BUM9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.4■□□□□ 0.86
Usp43Q8BUM9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Usp43Q8BUM9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp43Q8BUM9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.4■□□□□ 0.86
Usp43Q8BUM9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Usp43Q8BUM9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.39■□□□□ 0.86
Usp43Q8BUM9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
Usp43Q8BUM9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.39■□□□□ 0.85
Usp43Q8BUM9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.39■□□□□ 0.85
Usp43Q8BUM9 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp43Q8BUM9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp43Q8BUM9 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp43Q8BUM9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.38■□□□□ 0.85
Usp43Q8BUM9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Usp43Q8BUM9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp43Q8BUM9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
Usp43Q8BUM9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp43Q8BUM9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.37■□□□□ 0.85
Usp43Q8BUM9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.37■□□□□ 0.85
Usp43Q8BUM9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Usp43Q8BUM9 Mir6236-201ENSMUST00000184437 123 ntBASIC20.37■□□□□ 0.85
Usp43Q8BUM9 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp43Q8BUM9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.37■□□□□ 0.85
Usp43Q8BUM9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp43Q8BUM9 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Usp43Q8BUM9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.37■□□□□ 0.85
Usp43Q8BUM9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp43Q8BUM9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp43Q8BUM9 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp43Q8BUM9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.36■□□□□ 0.85
Usp43Q8BUM9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp43Q8BUM9 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Usp43Q8BUM9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Usp43Q8BUM9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp43Q8BUM9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Usp43Q8BUM9 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Usp43Q8BUM9 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp43Q8BUM9 Gm12922-201ENSMUST00000120626 809 ntBASIC20.35■□□□□ 0.85
Usp43Q8BUM9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.35■□□□□ 0.85
Usp43Q8BUM9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp43Q8BUM9 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.35■□□□□ 0.85
Usp43Q8BUM9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp43Q8BUM9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp43Q8BUM9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp43Q8BUM9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp43Q8BUM9 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp43Q8BUM9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp43Q8BUM9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp43Q8BUM9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp43Q8BUM9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.34■□□□□ 0.85
Usp43Q8BUM9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Usp43Q8BUM9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp43Q8BUM9 Golgb1-201ENSMUST00000023534 498 ntBASIC20.34■□□□□ 0.85
Usp43Q8BUM9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp43Q8BUM9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp43Q8BUM9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp43Q8BUM9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp43Q8BUM9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Usp43Q8BUM9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms