Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.36■□□□□ 0.69
Cpne3Q8BT60 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpne3Q8BT60 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpne3Q8BT60 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpne3Q8BT60 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpne3Q8BT60 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cpne3Q8BT60 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpne3Q8BT60 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpne3Q8BT60 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Cpne3Q8BT60 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpne3Q8BT60 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Cpne3Q8BT60 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpne3Q8BT60 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpne3Q8BT60 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.34■□□□□ 0.69
Cpne3Q8BT60 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpne3Q8BT60 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpne3Q8BT60 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpne3Q8BT60 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Cpne3Q8BT60 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.34■□□□□ 0.69
Cpne3Q8BT60 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.34■□□□□ 0.69
Cpne3Q8BT60 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.34■□□□□ 0.69
Cpne3Q8BT60 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Cpne3Q8BT60 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpne3Q8BT60 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpne3Q8BT60 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Cpne3Q8BT60 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpne3Q8BT60 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Cpne3Q8BT60 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cpne3Q8BT60 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cpne3Q8BT60 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.33■□□□□ 0.69
Cpne3Q8BT60 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cpne3Q8BT60 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cpne3Q8BT60 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cpne3Q8BT60 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cpne3Q8BT60 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cpne3Q8BT60 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpne3Q8BT60 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpne3Q8BT60 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cpne3Q8BT60 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpne3Q8BT60 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpne3Q8BT60 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cpne3Q8BT60 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpne3Q8BT60 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpne3Q8BT60 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpne3Q8BT60 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.31■□□□□ 0.68
Cpne3Q8BT60 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpne3Q8BT60 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.31■□□□□ 0.68
Cpne3Q8BT60 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpne3Q8BT60 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Cpne3Q8BT60 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.31■□□□□ 0.68
Cpne3Q8BT60 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpne3Q8BT60 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpne3Q8BT60 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.31■□□□□ 0.68
Cpne3Q8BT60 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.31■□□□□ 0.68
Cpne3Q8BT60 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cpne3Q8BT60 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cpne3Q8BT60 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpne3Q8BT60 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpne3Q8BT60 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cpne3Q8BT60 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Cpne3Q8BT60 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpne3Q8BT60 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpne3Q8BT60 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpne3Q8BT60 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpne3Q8BT60 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpne3Q8BT60 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.3■□□□□ 0.68
Cpne3Q8BT60 Gm15820-201ENSMUST00000201566 728 ntBASIC19.3■□□□□ 0.68
Cpne3Q8BT60 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cpne3Q8BT60 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpne3Q8BT60 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpne3Q8BT60 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.3■□□□□ 0.68
Cpne3Q8BT60 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpne3Q8BT60 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpne3Q8BT60 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cpne3Q8BT60 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpne3Q8BT60 Iqck-206ENSMUST00000208658 2891 ntBASIC19.29■□□□□ 0.68
Cpne3Q8BT60 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpne3Q8BT60 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Cpne3Q8BT60 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpne3Q8BT60 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.29■□□□□ 0.68
Cpne3Q8BT60 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.29■□□□□ 0.68
Cpne3Q8BT60 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.29■□□□□ 0.68
Cpne3Q8BT60 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.29■□□□□ 0.68
Cpne3Q8BT60 Gm40881-201ENSMUST00000223397 166 ntBASIC19.29■□□□□ 0.68
Cpne3Q8BT60 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpne3Q8BT60 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cpne3Q8BT60 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpne3Q8BT60 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpne3Q8BT60 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpne3Q8BT60 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cpne3Q8BT60 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.28■□□□□ 0.68
Cpne3Q8BT60 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpne3Q8BT60 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpne3Q8BT60 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.28■□□□□ 0.68
Cpne3Q8BT60 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cpne3Q8BT60 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cpne3Q8BT60 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Cpne3Q8BT60 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpne3Q8BT60 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpne3Q8BT60 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms