Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.5■□□□□ 0.87
Suds3Q8BR65 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Suds3Q8BR65 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Suds3Q8BR65 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Suds3Q8BR65 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.5■□□□□ 0.87
Suds3Q8BR65 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Suds3Q8BR65 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Suds3Q8BR65 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.49■□□□□ 0.87
Suds3Q8BR65 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Suds3Q8BR65 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Suds3Q8BR65 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.49■□□□□ 0.87
Suds3Q8BR65 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Suds3Q8BR65 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.49■□□□□ 0.87
Suds3Q8BR65 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Suds3Q8BR65 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Suds3Q8BR65 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Suds3Q8BR65 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Suds3Q8BR65 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Suds3Q8BR65 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Suds3Q8BR65 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Suds3Q8BR65 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Suds3Q8BR65 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Suds3Q8BR65 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Suds3Q8BR65 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
Suds3Q8BR65 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Suds3Q8BR65 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Suds3Q8BR65 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Suds3Q8BR65 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.47■□□□□ 0.87
Suds3Q8BR65 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Suds3Q8BR65 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.47■□□□□ 0.87
Suds3Q8BR65 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Suds3Q8BR65 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.47■□□□□ 0.87
Suds3Q8BR65 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Suds3Q8BR65 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Suds3Q8BR65 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Suds3Q8BR65 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Suds3Q8BR65 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.46■□□□□ 0.87
Suds3Q8BR65 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Suds3Q8BR65 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Suds3Q8BR65 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.46■□□□□ 0.87
Suds3Q8BR65 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.46■□□□□ 0.87
Suds3Q8BR65 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Suds3Q8BR65 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Suds3Q8BR65 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.45■□□□□ 0.86
Suds3Q8BR65 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Suds3Q8BR65 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.45■□□□□ 0.86
Suds3Q8BR65 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Suds3Q8BR65 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Suds3Q8BR65 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Suds3Q8BR65 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Suds3Q8BR65 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Suds3Q8BR65 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Suds3Q8BR65 Iqck-206ENSMUST00000208658 2891 ntBASIC20.43■□□□□ 0.86
Suds3Q8BR65 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.43■□□□□ 0.86
Suds3Q8BR65 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Suds3Q8BR65 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Suds3Q8BR65 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Suds3Q8BR65 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Suds3Q8BR65 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Suds3Q8BR65 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Suds3Q8BR65 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.43■□□□□ 0.86
Suds3Q8BR65 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Suds3Q8BR65 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Suds3Q8BR65 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Suds3Q8BR65 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Suds3Q8BR65 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.42■□□□□ 0.86
Suds3Q8BR65 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Suds3Q8BR65 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Suds3Q8BR65 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Suds3Q8BR65 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.42■□□□□ 0.86
Suds3Q8BR65 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Suds3Q8BR65 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Suds3Q8BR65 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Suds3Q8BR65 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Suds3Q8BR65 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Suds3Q8BR65 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Suds3Q8BR65 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.41■□□□□ 0.86
Suds3Q8BR65 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Suds3Q8BR65 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Suds3Q8BR65 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.41■□□□□ 0.86
Suds3Q8BR65 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Suds3Q8BR65 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Suds3Q8BR65 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Suds3Q8BR65 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Suds3Q8BR65 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Suds3Q8BR65 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Suds3Q8BR65 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Suds3Q8BR65 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Suds3Q8BR65 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Suds3Q8BR65 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Suds3Q8BR65 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Suds3Q8BR65 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Suds3Q8BR65 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Suds3Q8BR65 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.39■□□□□ 0.86
Suds3Q8BR65 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Suds3Q8BR65 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Suds3Q8BR65 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Suds3Q8BR65 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Suds3Q8BR65 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Suds3Q8BR65 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms