Protein–RNA interactions for Protein: Q8BMQ2

Gtf3c4, General transcription factor 3C polypeptide 4, mousemouse

Known RBP Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c4Q8BMQ2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Gtf3c4Q8BMQ2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gtf3c4Q8BMQ2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Gtf3c4Q8BMQ2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Gtf3c4Q8BMQ2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gtf3c4Q8BMQ2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Gtf3c4Q8BMQ2 Gm12922-201ENSMUST00000120626 809 ntBASIC20.6■□□□□ 0.89
Gtf3c4Q8BMQ2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gtf3c4Q8BMQ2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.6■□□□□ 0.89
Gtf3c4Q8BMQ2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Gtf3c4Q8BMQ2 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Gtf3c4Q8BMQ2 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.6■□□□□ 0.89
Gtf3c4Q8BMQ2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gtf3c4Q8BMQ2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gtf3c4Q8BMQ2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gtf3c4Q8BMQ2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gtf3c4Q8BMQ2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Gtf3c4Q8BMQ2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.59■□□□□ 0.89
Gtf3c4Q8BMQ2 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Gtf3c4Q8BMQ2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gtf3c4Q8BMQ2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gtf3c4Q8BMQ2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gtf3c4Q8BMQ2 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gtf3c4Q8BMQ2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Gtf3c4Q8BMQ2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gtf3c4Q8BMQ2 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gtf3c4Q8BMQ2 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Gtf3c4Q8BMQ2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.59■□□□□ 0.89
Gtf3c4Q8BMQ2 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Gtf3c4Q8BMQ2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Gtf3c4Q8BMQ2 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gtf3c4Q8BMQ2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Gtf3c4Q8BMQ2 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Gtf3c4Q8BMQ2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Gtf3c4Q8BMQ2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Gtf3c4Q8BMQ2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.58■□□□□ 0.89
Gtf3c4Q8BMQ2 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.58■□□□□ 0.88
Gtf3c4Q8BMQ2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Gtf3c4Q8BMQ2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
Gtf3c4Q8BMQ2 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gtf3c4Q8BMQ2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gtf3c4Q8BMQ2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.57■□□□□ 0.88
Gtf3c4Q8BMQ2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Gtf3c4Q8BMQ2 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gtf3c4Q8BMQ2 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gtf3c4Q8BMQ2 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Gtf3c4Q8BMQ2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gtf3c4Q8BMQ2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.57■□□□□ 0.88
Gtf3c4Q8BMQ2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.57■□□□□ 0.88
Gtf3c4Q8BMQ2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Gtf3c4Q8BMQ2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gtf3c4Q8BMQ2 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gtf3c4Q8BMQ2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gtf3c4Q8BMQ2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gtf3c4Q8BMQ2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.56■□□□□ 0.88
Gtf3c4Q8BMQ2 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gtf3c4Q8BMQ2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gtf3c4Q8BMQ2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gtf3c4Q8BMQ2 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gtf3c4Q8BMQ2 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gtf3c4Q8BMQ2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gtf3c4Q8BMQ2 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gtf3c4Q8BMQ2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gtf3c4Q8BMQ2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gtf3c4Q8BMQ2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gtf3c4Q8BMQ2 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Gtf3c4Q8BMQ2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Gtf3c4Q8BMQ2 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.55■□□□□ 0.88
Gtf3c4Q8BMQ2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gtf3c4Q8BMQ2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gtf3c4Q8BMQ2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gtf3c4Q8BMQ2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gtf3c4Q8BMQ2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gtf3c4Q8BMQ2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gtf3c4Q8BMQ2 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.54■□□□□ 0.88
Gtf3c4Q8BMQ2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gtf3c4Q8BMQ2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.54■□□□□ 0.88
Gtf3c4Q8BMQ2 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.54■□□□□ 0.88
Gtf3c4Q8BMQ2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gtf3c4Q8BMQ2 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gtf3c4Q8BMQ2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gtf3c4Q8BMQ2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.54■□□□□ 0.88
Gtf3c4Q8BMQ2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gtf3c4Q8BMQ2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gtf3c4Q8BMQ2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Gtf3c4Q8BMQ2 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.53■□□□□ 0.88
Gtf3c4Q8BMQ2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gtf3c4Q8BMQ2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gtf3c4Q8BMQ2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gtf3c4Q8BMQ2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.53■□□□□ 0.88
Gtf3c4Q8BMQ2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gtf3c4Q8BMQ2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gtf3c4Q8BMQ2 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.52■□□□□ 0.88
Gtf3c4Q8BMQ2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gtf3c4Q8BMQ2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gtf3c4Q8BMQ2 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Gtf3c4Q8BMQ2 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Gtf3c4Q8BMQ2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Gtf3c4Q8BMQ2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
Gtf3c4Q8BMQ2 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms