Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Gm21956-201ENSMUST00000179946 522 ntBASIC17.43■□□□□ 0.38
Srrm4Q8BKA3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Srrm4Q8BKA3 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.43■□□□□ 0.38
Srrm4Q8BKA3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Srrm4Q8BKA3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Srrm4Q8BKA3 Golph3-202ENSMUST00000226517 2359 ntBASIC17.42■□□□□ 0.38
Srrm4Q8BKA3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Srrm4Q8BKA3 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Srrm4Q8BKA3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Srrm4Q8BKA3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Srrm4Q8BKA3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Srrm4Q8BKA3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Srrm4Q8BKA3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Srrm4Q8BKA3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Srrm4Q8BKA3 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Srrm4Q8BKA3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Srrm4Q8BKA3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Srrm4Q8BKA3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Srrm4Q8BKA3 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.41■□□□□ 0.38
Srrm4Q8BKA3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Srrm4Q8BKA3 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Srrm4Q8BKA3 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Srrm4Q8BKA3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Srrm4Q8BKA3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Srrm4Q8BKA3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Srrm4Q8BKA3 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Srrm4Q8BKA3 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.4■□□□□ 0.38
Srrm4Q8BKA3 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.4■□□□□ 0.38
Srrm4Q8BKA3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.4■□□□□ 0.38
Srrm4Q8BKA3 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Srrm4Q8BKA3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Srrm4Q8BKA3 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.4■□□□□ 0.38
Srrm4Q8BKA3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Srrm4Q8BKA3 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Srrm4Q8BKA3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Srrm4Q8BKA3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Srrm4Q8BKA3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Srrm4Q8BKA3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Srrm4Q8BKA3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Srrm4Q8BKA3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Srrm4Q8BKA3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Srrm4Q8BKA3 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Srrm4Q8BKA3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Srrm4Q8BKA3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Srrm4Q8BKA3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Srrm4Q8BKA3 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Srrm4Q8BKA3 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Srrm4Q8BKA3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Srrm4Q8BKA3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Srrm4Q8BKA3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Srrm4Q8BKA3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Srrm4Q8BKA3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Srrm4Q8BKA3 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Srrm4Q8BKA3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.37■□□□□ 0.37
Srrm4Q8BKA3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Srrm4Q8BKA3 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Srrm4Q8BKA3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Srrm4Q8BKA3 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Srrm4Q8BKA3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Srrm4Q8BKA3 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Srrm4Q8BKA3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Srrm4Q8BKA3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Srrm4Q8BKA3 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Srrm4Q8BKA3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Srrm4Q8BKA3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.36■□□□□ 0.37
Srrm4Q8BKA3 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.36■□□□□ 0.37
Srrm4Q8BKA3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Srrm4Q8BKA3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Srrm4Q8BKA3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Srrm4Q8BKA3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Srrm4Q8BKA3 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Srrm4Q8BKA3 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Srrm4Q8BKA3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Srrm4Q8BKA3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Srrm4Q8BKA3 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Srrm4Q8BKA3 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Srrm4Q8BKA3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Srrm4Q8BKA3 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Srrm4Q8BKA3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Srrm4Q8BKA3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Srrm4Q8BKA3 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.35■□□□□ 0.37
Srrm4Q8BKA3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Srrm4Q8BKA3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Srrm4Q8BKA3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.35■□□□□ 0.37
Srrm4Q8BKA3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Srrm4Q8BKA3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Srrm4Q8BKA3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Srrm4Q8BKA3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Srrm4Q8BKA3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Srrm4Q8BKA3 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Srrm4Q8BKA3 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Srrm4Q8BKA3 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.34■□□□□ 0.37
Srrm4Q8BKA3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Srrm4Q8BKA3 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Srrm4Q8BKA3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Srrm4Q8BKA3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Srrm4Q8BKA3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.37
Srrm4Q8BKA3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Srrm4Q8BKA3 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Srrm4Q8BKA3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms