Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Tdp1Q8BJ37 Gm37179-201ENSMUST00000194862 823 ntBASIC22.38■■□□□ 1.17
Tdp1Q8BJ37 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Tdp1Q8BJ37 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Tdp1Q8BJ37 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC22.38■■□□□ 1.17
Tdp1Q8BJ37 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Tdp1Q8BJ37 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Tdp1Q8BJ37 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Tdp1Q8BJ37 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Tdp1Q8BJ37 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Tdp1Q8BJ37 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Tdp1Q8BJ37 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Tdp1Q8BJ37 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC22.37■■□□□ 1.17
Tdp1Q8BJ37 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC22.37■■□□□ 1.17
Tdp1Q8BJ37 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Tdp1Q8BJ37 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Tdp1Q8BJ37 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC22.36■■□□□ 1.17
Tdp1Q8BJ37 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Tdp1Q8BJ37 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Tdp1Q8BJ37 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Tdp1Q8BJ37 Mir6236-201ENSMUST00000184437 123 ntBASIC22.36■■□□□ 1.17
Tdp1Q8BJ37 Gm10033-202ENSMUST00000211874 928 ntBASIC22.36■■□□□ 1.17
Tdp1Q8BJ37 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Tdp1Q8BJ37 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Tdp1Q8BJ37 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC22.35■■□□□ 1.17
Tdp1Q8BJ37 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Tdp1Q8BJ37 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Tdp1Q8BJ37 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Tdp1Q8BJ37 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Tdp1Q8BJ37 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tdp1Q8BJ37 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tdp1Q8BJ37 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC22.34■■□□□ 1.17
Tdp1Q8BJ37 Gm18671-201ENSMUST00000214826 683 ntBASIC22.34■■□□□ 1.17
Tdp1Q8BJ37 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC22.34■■□□□ 1.17
Tdp1Q8BJ37 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Tdp1Q8BJ37 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC22.34■■□□□ 1.17
Tdp1Q8BJ37 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tdp1Q8BJ37 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Tdp1Q8BJ37 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Tdp1Q8BJ37 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Tdp1Q8BJ37 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Tdp1Q8BJ37 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
Tdp1Q8BJ37 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Tdp1Q8BJ37 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Tdp1Q8BJ37 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC22.33■■□□□ 1.17
Tdp1Q8BJ37 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Tdp1Q8BJ37 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC22.33■■□□□ 1.16
Tdp1Q8BJ37 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Tdp1Q8BJ37 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Tdp1Q8BJ37 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tdp1Q8BJ37 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tdp1Q8BJ37 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC22.32■■□□□ 1.16
Tdp1Q8BJ37 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Tdp1Q8BJ37 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tdp1Q8BJ37 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tdp1Q8BJ37 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Tdp1Q8BJ37 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.32■■□□□ 1.16
Tdp1Q8BJ37 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Tdp1Q8BJ37 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Tdp1Q8BJ37 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC22.31■■□□□ 1.16
Tdp1Q8BJ37 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Tdp1Q8BJ37 AV356131-201ENSMUST00000206201 750 ntBASIC22.31■■□□□ 1.16
Tdp1Q8BJ37 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Tdp1Q8BJ37 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Tdp1Q8BJ37 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Tdp1Q8BJ37 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Tdp1Q8BJ37 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Tdp1Q8BJ37 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Tdp1Q8BJ37 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Tdp1Q8BJ37 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Tdp1Q8BJ37 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Tdp1Q8BJ37 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC22.3■■□□□ 1.16
Tdp1Q8BJ37 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Tdp1Q8BJ37 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Tdp1Q8BJ37 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Tdp1Q8BJ37 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Tdp1Q8BJ37 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Tdp1Q8BJ37 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Tdp1Q8BJ37 Gm26766-202ENSMUST00000227544 2347 ntBASIC22.29■■□□□ 1.16
Tdp1Q8BJ37 Gm42778-201ENSMUST00000199644 553 ntBASIC22.29■■□□□ 1.16
Tdp1Q8BJ37 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Tdp1Q8BJ37 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Tdp1Q8BJ37 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Tdp1Q8BJ37 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Tdp1Q8BJ37 AC122428.2-201ENSMUST00000216321 1832 ntBASIC22.29■■□□□ 1.16
Tdp1Q8BJ37 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Tdp1Q8BJ37 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC22.28■■□□□ 1.16
Tdp1Q8BJ37 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Tdp1Q8BJ37 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Tdp1Q8BJ37 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Tdp1Q8BJ37 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Tdp1Q8BJ37 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
Tdp1Q8BJ37 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Tdp1Q8BJ37 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC22.27■■□□□ 1.16
Tdp1Q8BJ37 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Tdp1Q8BJ37 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Tdp1Q8BJ37 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Tdp1Q8BJ37 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Tdp1Q8BJ37 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC22.26■■□□□ 1.15
Tdp1Q8BJ37 AC137127.1-201ENSMUST00000213466 1078 ntBASIC22.26■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms