Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Rnf38Q8BI21 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf38Q8BI21 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf38Q8BI21 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf38Q8BI21 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf38Q8BI21 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Rnf38Q8BI21 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf38Q8BI21 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.42■□□□□ 0.7
Rnf38Q8BI21 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf38Q8BI21 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Rnf38Q8BI21 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.42■□□□□ 0.7
Rnf38Q8BI21 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf38Q8BI21 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf38Q8BI21 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf38Q8BI21 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.42■□□□□ 0.7
Rnf38Q8BI21 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.42■□□□□ 0.7
Rnf38Q8BI21 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf38Q8BI21 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf38Q8BI21 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf38Q8BI21 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf38Q8BI21 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf38Q8BI21 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.41■□□□□ 0.7
Rnf38Q8BI21 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Rnf38Q8BI21 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf38Q8BI21 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Rnf38Q8BI21 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Rnf38Q8BI21 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf38Q8BI21 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf38Q8BI21 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf38Q8BI21 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf38Q8BI21 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf38Q8BI21 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf38Q8BI21 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf38Q8BI21 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rnf38Q8BI21 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rnf38Q8BI21 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rnf38Q8BI21 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.39■□□□□ 0.7
Rnf38Q8BI21 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Rnf38Q8BI21 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Rnf38Q8BI21 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf38Q8BI21 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf38Q8BI21 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf38Q8BI21 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.39■□□□□ 0.69
Rnf38Q8BI21 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Rnf38Q8BI21 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.38■□□□□ 0.69
Rnf38Q8BI21 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.38■□□□□ 0.69
Rnf38Q8BI21 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.38■□□□□ 0.69
Rnf38Q8BI21 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf38Q8BI21 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf38Q8BI21 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf38Q8BI21 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf38Q8BI21 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf38Q8BI21 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf38Q8BI21 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf38Q8BI21 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Rnf38Q8BI21 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf38Q8BI21 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf38Q8BI21 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.37■□□□□ 0.69
Rnf38Q8BI21 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.37■□□□□ 0.69
Rnf38Q8BI21 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.37■□□□□ 0.69
Rnf38Q8BI21 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf38Q8BI21 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf38Q8BI21 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf38Q8BI21 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Rnf38Q8BI21 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf38Q8BI21 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.37■□□□□ 0.69
Rnf38Q8BI21 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf38Q8BI21 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf38Q8BI21 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf38Q8BI21 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Rnf38Q8BI21 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf38Q8BI21 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Rnf38Q8BI21 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf38Q8BI21 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf38Q8BI21 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf38Q8BI21 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf38Q8BI21 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf38Q8BI21 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf38Q8BI21 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Rnf38Q8BI21 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf38Q8BI21 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf38Q8BI21 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Rnf38Q8BI21 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Rnf38Q8BI21 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.34■□□□□ 0.69
Rnf38Q8BI21 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.34■□□□□ 0.69
Rnf38Q8BI21 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Rnf38Q8BI21 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf38Q8BI21 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rnf38Q8BI21 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Rnf38Q8BI21 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.33■□□□□ 0.68
Rnf38Q8BI21 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.33■□□□□ 0.68
Rnf38Q8BI21 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf38Q8BI21 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf38Q8BI21 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Rnf38Q8BI21 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf38Q8BI21 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf38Q8BI21 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf38Q8BI21 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf38Q8BI21 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Rnf38Q8BI21 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms