Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim23Q8BGX0 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim23Q8BGX0 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.43■□□□□ 0.7
Trim23Q8BGX0 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim23Q8BGX0 Gm43137-201ENSMUST00000198052 594 ntBASIC19.43■□□□□ 0.7
Trim23Q8BGX0 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim23Q8BGX0 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim23Q8BGX0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim23Q8BGX0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim23Q8BGX0 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim23Q8BGX0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.42■□□□□ 0.7
Trim23Q8BGX0 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim23Q8BGX0 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim23Q8BGX0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim23Q8BGX0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim23Q8BGX0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim23Q8BGX0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim23Q8BGX0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim23Q8BGX0 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim23Q8BGX0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Trim23Q8BGX0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim23Q8BGX0 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim23Q8BGX0 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Trim23Q8BGX0 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.41■□□□□ 0.7
Trim23Q8BGX0 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Trim23Q8BGX0 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Trim23Q8BGX0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim23Q8BGX0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Trim23Q8BGX0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Trim23Q8BGX0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim23Q8BGX0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Trim23Q8BGX0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim23Q8BGX0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim23Q8BGX0 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.4■□□□□ 0.7
Trim23Q8BGX0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.4■□□□□ 0.7
Trim23Q8BGX0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim23Q8BGX0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.4■□□□□ 0.7
Trim23Q8BGX0 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.4■□□□□ 0.7
Trim23Q8BGX0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim23Q8BGX0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
Trim23Q8BGX0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim23Q8BGX0 Mir6236-201ENSMUST00000184437 123 ntBASIC19.39■□□□□ 0.69
Trim23Q8BGX0 Gm45417-201ENSMUST00000209533 758 ntBASIC19.39■□□□□ 0.69
Trim23Q8BGX0 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.39■□□□□ 0.69
Trim23Q8BGX0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim23Q8BGX0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim23Q8BGX0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim23Q8BGX0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim23Q8BGX0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim23Q8BGX0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim23Q8BGX0 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim23Q8BGX0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim23Q8BGX0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim23Q8BGX0 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim23Q8BGX0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim23Q8BGX0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
Trim23Q8BGX0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim23Q8BGX0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.37■□□□□ 0.69
Trim23Q8BGX0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim23Q8BGX0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim23Q8BGX0 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Trim23Q8BGX0 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Trim23Q8BGX0 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim23Q8BGX0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim23Q8BGX0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim23Q8BGX0 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Trim23Q8BGX0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim23Q8BGX0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim23Q8BGX0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim23Q8BGX0 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim23Q8BGX0 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim23Q8BGX0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim23Q8BGX0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim23Q8BGX0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim23Q8BGX0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Trim23Q8BGX0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim23Q8BGX0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim23Q8BGX0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim23Q8BGX0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim23Q8BGX0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim23Q8BGX0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim23Q8BGX0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim23Q8BGX0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim23Q8BGX0 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim23Q8BGX0 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim23Q8BGX0 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Trim23Q8BGX0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Trim23Q8BGX0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim23Q8BGX0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Trim23Q8BGX0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Trim23Q8BGX0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Trim23Q8BGX0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim23Q8BGX0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim23Q8BGX0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim23Q8BGX0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Trim23Q8BGX0 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim23Q8BGX0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Trim23Q8BGX0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim23Q8BGX0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim23Q8BGX0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms