Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ubp1Q811S7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ubp1Q811S7 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ubp1Q811S7 Gm21956-201ENSMUST00000179946 522 ntBASIC19.78■□□□□ 0.76
Ubp1Q811S7 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.78■□□□□ 0.76
Ubp1Q811S7 Gm43530-201ENSMUST00000195920 274 ntBASIC19.78■□□□□ 0.76
Ubp1Q811S7 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Ubp1Q811S7 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ubp1Q811S7 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ubp1Q811S7 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Ubp1Q811S7 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ubp1Q811S7 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ubp1Q811S7 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ubp1Q811S7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ubp1Q811S7 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ubp1Q811S7 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.77■□□□□ 0.76
Ubp1Q811S7 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.77■□□□□ 0.76
Ubp1Q811S7 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.77■□□□□ 0.76
Ubp1Q811S7 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ubp1Q811S7 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Ubp1Q811S7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Ubp1Q811S7 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Ubp1Q811S7 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ubp1Q811S7 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Ubp1Q811S7 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ubp1Q811S7 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ubp1Q811S7 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.76■□□□□ 0.75
Ubp1Q811S7 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ubp1Q811S7 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ubp1Q811S7 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ubp1Q811S7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ubp1Q811S7 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ubp1Q811S7 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Ubp1Q811S7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ubp1Q811S7 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ubp1Q811S7 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ubp1Q811S7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Ubp1Q811S7 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ubp1Q811S7 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ubp1Q811S7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ubp1Q811S7 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.74■□□□□ 0.75
Ubp1Q811S7 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.74■□□□□ 0.75
Ubp1Q811S7 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ubp1Q811S7 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.74■□□□□ 0.75
Ubp1Q811S7 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ubp1Q811S7 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ubp1Q811S7 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubp1Q811S7 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ubp1Q811S7 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubp1Q811S7 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ubp1Q811S7 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubp1Q811S7 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ubp1Q811S7 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.73■□□□□ 0.75
Ubp1Q811S7 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubp1Q811S7 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ubp1Q811S7 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.73■□□□□ 0.75
Ubp1Q811S7 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.73■□□□□ 0.75
Ubp1Q811S7 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubp1Q811S7 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubp1Q811S7 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ubp1Q811S7 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ubp1Q811S7 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Ubp1Q811S7 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ubp1Q811S7 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ubp1Q811S7 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.72■□□□□ 0.75
Ubp1Q811S7 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.72■□□□□ 0.75
Ubp1Q811S7 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.72■□□□□ 0.75
Ubp1Q811S7 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ubp1Q811S7 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ubp1Q811S7 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ubp1Q811S7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ubp1Q811S7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ubp1Q811S7 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ubp1Q811S7 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ubp1Q811S7 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ubp1Q811S7 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ubp1Q811S7 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ubp1Q811S7 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ubp1Q811S7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ubp1Q811S7 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.71■□□□□ 0.75
Ubp1Q811S7 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ubp1Q811S7 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Ubp1Q811S7 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ubp1Q811S7 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ubp1Q811S7 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ubp1Q811S7 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ubp1Q811S7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ubp1Q811S7 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ubp1Q811S7 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.7■□□□□ 0.74
Ubp1Q811S7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ubp1Q811S7 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ubp1Q811S7 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ubp1Q811S7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Ubp1Q811S7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ubp1Q811S7 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ubp1Q811S7 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ubp1Q811S7 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ubp1Q811S7 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ubp1Q811S7 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Ubp1Q811S7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms