Protein–RNA interactions for Protein: Q810A7

Ddx42, ATP-dependent RNA helicase DDX42, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx42Q810A7 Gm7417-201ENSMUST00000192950 473 ntBASIC20.21■□□□□ 0.83
Ddx42Q810A7 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Ddx42Q810A7 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx42Q810A7 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx42Q810A7 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx42Q810A7 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Ddx42Q810A7 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx42Q810A7 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx42Q810A7 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx42Q810A7 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx42Q810A7 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Ddx42Q810A7 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx42Q810A7 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.2■□□□□ 0.82
Ddx42Q810A7 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.2■□□□□ 0.82
Ddx42Q810A7 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx42Q810A7 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Ddx42Q810A7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Ddx42Q810A7 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Ddx42Q810A7 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx42Q810A7 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Ddx42Q810A7 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Ddx42Q810A7 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx42Q810A7 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Ddx42Q810A7 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Ddx42Q810A7 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.19■□□□□ 0.82
Ddx42Q810A7 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.19■□□□□ 0.82
Ddx42Q810A7 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.19■□□□□ 0.82
Ddx42Q810A7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx42Q810A7 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx42Q810A7 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx42Q810A7 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx42Q810A7 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx42Q810A7 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx42Q810A7 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx42Q810A7 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx42Q810A7 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Ddx42Q810A7 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Ddx42Q810A7 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.18■□□□□ 0.82
Ddx42Q810A7 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx42Q810A7 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx42Q810A7 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Ddx42Q810A7 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx42Q810A7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx42Q810A7 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Ddx42Q810A7 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx42Q810A7 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx42Q810A7 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx42Q810A7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx42Q810A7 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx42Q810A7 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx42Q810A7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx42Q810A7 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx42Q810A7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx42Q810A7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx42Q810A7 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx42Q810A7 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.16■□□□□ 0.82
Ddx42Q810A7 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.16■□□□□ 0.82
Ddx42Q810A7 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx42Q810A7 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx42Q810A7 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Ddx42Q810A7 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx42Q810A7 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx42Q810A7 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.15■□□□□ 0.82
Ddx42Q810A7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx42Q810A7 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.15■□□□□ 0.82
Ddx42Q810A7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx42Q810A7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx42Q810A7 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ddx42Q810A7 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
Ddx42Q810A7 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx42Q810A7 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.14■□□□□ 0.81
Ddx42Q810A7 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx42Q810A7 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.14■□□□□ 0.81
Ddx42Q810A7 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx42Q810A7 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.14■□□□□ 0.81
Ddx42Q810A7 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx42Q810A7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.14■□□□□ 0.81
Ddx42Q810A7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Ddx42Q810A7 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx42Q810A7 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx42Q810A7 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx42Q810A7 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx42Q810A7 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx42Q810A7 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx42Q810A7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Ddx42Q810A7 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx42Q810A7 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.12■□□□□ 0.81
Ddx42Q810A7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.12■□□□□ 0.81
Ddx42Q810A7 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx42Q810A7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx42Q810A7 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx42Q810A7 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.12■□□□□ 0.81
Ddx42Q810A7 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.12■□□□□ 0.81
Ddx42Q810A7 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.12■□□□□ 0.81
Ddx42Q810A7 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.12■□□□□ 0.81
Ddx42Q810A7 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx42Q810A7 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.12■□□□□ 0.81
Ddx42Q810A7 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.12■□□□□ 0.81
Ddx42Q810A7 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx42Q810A7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms