Protein–RNA interactions for Protein: Q80YS6

Afap1, Actin filament-associated protein 1, mousemouse

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Afap1Q80YS6 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Afap1Q80YS6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Afap1Q80YS6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Afap1Q80YS6 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Afap1Q80YS6 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Afap1Q80YS6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC29.22■■■□□ 2.27
Afap1Q80YS6 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Afap1Q80YS6 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC29.22■■■□□ 2.27
Afap1Q80YS6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC29.22■■■□□ 2.27
Afap1Q80YS6 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC29.22■■■□□ 2.27
Afap1Q80YS6 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC29.21■■■□□ 2.27
Afap1Q80YS6 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Afap1Q80YS6 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Afap1Q80YS6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Afap1Q80YS6 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC29.21■■■□□ 2.27
Afap1Q80YS6 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.27
Afap1Q80YS6 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.27
Afap1Q80YS6 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
Afap1Q80YS6 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Afap1Q80YS6 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
Afap1Q80YS6 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Afap1Q80YS6 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Afap1Q80YS6 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Afap1Q80YS6 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Afap1Q80YS6 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Afap1Q80YS6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC29.18■■■□□ 2.26
Afap1Q80YS6 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC29.18■■■□□ 2.26
Afap1Q80YS6 Gm3807-201ENSMUST00000193520 1168 ntBASIC29.18■■■□□ 2.26
Afap1Q80YS6 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Afap1Q80YS6 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
Afap1Q80YS6 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC29.18■■■□□ 2.26
Afap1Q80YS6 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Afap1Q80YS6 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
Afap1Q80YS6 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC29.17■■■□□ 2.26
Afap1Q80YS6 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC29.17■■■□□ 2.26
Afap1Q80YS6 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC29.17■■■□□ 2.26
Afap1Q80YS6 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Afap1Q80YS6 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Afap1Q80YS6 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Afap1Q80YS6 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Afap1Q80YS6 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC29.16■■■□□ 2.26
Afap1Q80YS6 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Afap1Q80YS6 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC29.16■■■□□ 2.26
Afap1Q80YS6 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC29.16■■■□□ 2.26
Afap1Q80YS6 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC29.16■■■□□ 2.26
Afap1Q80YS6 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
Afap1Q80YS6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Afap1Q80YS6 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Afap1Q80YS6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC29.15■■■□□ 2.26
Afap1Q80YS6 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Afap1Q80YS6 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Afap1Q80YS6 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Afap1Q80YS6 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Afap1Q80YS6 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Afap1Q80YS6 AC158538.1-201ENSMUST00000225870 294 ntBASIC29.14■■■□□ 2.26
Afap1Q80YS6 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Afap1Q80YS6 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC29.14■■■□□ 2.25
Afap1Q80YS6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC29.14■■■□□ 2.25
Afap1Q80YS6 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Afap1Q80YS6 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Afap1Q80YS6 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC29.13■■■□□ 2.25
Afap1Q80YS6 Gm27801-201ENSMUST00000184174 223 ntBASIC29.13■■■□□ 2.25
Afap1Q80YS6 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC29.13■■■□□ 2.25
Afap1Q80YS6 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC29.13■■■□□ 2.25
Afap1Q80YS6 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC29.12■■■□□ 2.25
Afap1Q80YS6 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC29.12■■■□□ 2.25
Afap1Q80YS6 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC29.12■■■□□ 2.25
Afap1Q80YS6 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Afap1Q80YS6 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC29.12■■■□□ 2.25
Afap1Q80YS6 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Afap1Q80YS6 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
Afap1Q80YS6 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC29.11■■■□□ 2.25
Afap1Q80YS6 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Afap1Q80YS6 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Afap1Q80YS6 Gm13148-201ENSMUST00000118892 745 ntBASIC29.1■■■□□ 2.25
Afap1Q80YS6 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Afap1Q80YS6 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Afap1Q80YS6 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC29.1■■■□□ 2.25
Afap1Q80YS6 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Afap1Q80YS6 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Afap1Q80YS6 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC29.1■■■□□ 2.25
Afap1Q80YS6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC29.09■■■□□ 2.25
Afap1Q80YS6 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Afap1Q80YS6 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Afap1Q80YS6 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC29.09■■■□□ 2.25
Afap1Q80YS6 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
Afap1Q80YS6 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC29.09■■■□□ 2.25
Afap1Q80YS6 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Afap1Q80YS6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC29.09■■■□□ 2.25
Afap1Q80YS6 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC29.08■■■□□ 2.25
Afap1Q80YS6 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
Afap1Q80YS6 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
Afap1Q80YS6 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC29.08■■■□□ 2.25
Afap1Q80YS6 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
Afap1Q80YS6 Gm43859-201ENSMUST00000200075 1412 ntBASIC29.07■■■□□ 2.24
Afap1Q80YS6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC29.07■■■□□ 2.24
Afap1Q80YS6 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC29.07■■■□□ 2.24
Afap1Q80YS6 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Afap1Q80YS6 Gm13168-201ENSMUST00000121771 632 ntBASIC29.06■■■□□ 2.24
Afap1Q80YS6 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms