Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lrrtm4Q80XG9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lrrtm4Q80XG9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lrrtm4Q80XG9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.64■□□□□ 0.73
Lrrtm4Q80XG9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
Lrrtm4Q80XG9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Lrrtm4Q80XG9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lrrtm4Q80XG9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Lrrtm4Q80XG9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Lrrtm4Q80XG9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lrrtm4Q80XG9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Lrrtm4Q80XG9 Gm15039-201ENSMUST00000118914 875 ntBASIC19.63■□□□□ 0.73
Lrrtm4Q80XG9 Mir6236-201ENSMUST00000184437 123 ntBASIC19.63■□□□□ 0.73
Lrrtm4Q80XG9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.63■□□□□ 0.73
Lrrtm4Q80XG9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lrrtm4Q80XG9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Lrrtm4Q80XG9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lrrtm4Q80XG9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Lrrtm4Q80XG9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.62■□□□□ 0.73
Lrrtm4Q80XG9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Lrrtm4Q80XG9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Lrrtm4Q80XG9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lrrtm4Q80XG9 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lrrtm4Q80XG9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lrrtm4Q80XG9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Lrrtm4Q80XG9 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lrrtm4Q80XG9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lrrtm4Q80XG9 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lrrtm4Q80XG9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lrrtm4Q80XG9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.61■□□□□ 0.73
Lrrtm4Q80XG9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Lrrtm4Q80XG9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.61■□□□□ 0.73
Lrrtm4Q80XG9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lrrtm4Q80XG9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.6■□□□□ 0.73
Lrrtm4Q80XG9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Lrrtm4Q80XG9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Lrrtm4Q80XG9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lrrtm4Q80XG9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Lrrtm4Q80XG9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lrrtm4Q80XG9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Lrrtm4Q80XG9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lrrtm4Q80XG9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Lrrtm4Q80XG9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lrrtm4Q80XG9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lrrtm4Q80XG9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lrrtm4Q80XG9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lrrtm4Q80XG9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lrrtm4Q80XG9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lrrtm4Q80XG9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Lrrtm4Q80XG9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Lrrtm4Q80XG9 Mir7075-201ENSMUST00000184187 82 ntBASIC19.59■□□□□ 0.73
Lrrtm4Q80XG9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lrrtm4Q80XG9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Lrrtm4Q80XG9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Lrrtm4Q80XG9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Lrrtm4Q80XG9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.58■□□□□ 0.72
Lrrtm4Q80XG9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lrrtm4Q80XG9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Lrrtm4Q80XG9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Lrrtm4Q80XG9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lrrtm4Q80XG9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
Lrrtm4Q80XG9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Lrrtm4Q80XG9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lrrtm4Q80XG9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Lrrtm4Q80XG9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lrrtm4Q80XG9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lrrtm4Q80XG9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Lrrtm4Q80XG9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lrrtm4Q80XG9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lrrtm4Q80XG9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.56■□□□□ 0.72
Lrrtm4Q80XG9 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lrrtm4Q80XG9 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.56■□□□□ 0.72
Lrrtm4Q80XG9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lrrtm4Q80XG9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lrrtm4Q80XG9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Lrrtm4Q80XG9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lrrtm4Q80XG9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lrrtm4Q80XG9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lrrtm4Q80XG9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Lrrtm4Q80XG9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lrrtm4Q80XG9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Lrrtm4Q80XG9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Lrrtm4Q80XG9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lrrtm4Q80XG9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lrrtm4Q80XG9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lrrtm4Q80XG9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lrrtm4Q80XG9 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lrrtm4Q80XG9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lrrtm4Q80XG9 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.54■□□□□ 0.72
Lrrtm4Q80XG9 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.54■□□□□ 0.72
Lrrtm4Q80XG9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lrrtm4Q80XG9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
Lrrtm4Q80XG9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Lrrtm4Q80XG9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lrrtm4Q80XG9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Lrrtm4Q80XG9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Lrrtm4Q80XG9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Lrrtm4Q80XG9 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Lrrtm4Q80XG9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Lrrtm4Q80XG9 Gm6139-201ENSMUST00000079261 882 ntBASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms