Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.51■□□□□ 0.87
Tnrc18Q80WC3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.51■□□□□ 0.87
Tnrc18Q80WC3 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnrc18Q80WC3 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Tnrc18Q80WC3 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.51■□□□□ 0.87
Tnrc18Q80WC3 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.51■□□□□ 0.87
Tnrc18Q80WC3 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tnrc18Q80WC3 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Tnrc18Q80WC3 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tnrc18Q80WC3 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tnrc18Q80WC3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tnrc18Q80WC3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tnrc18Q80WC3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tnrc18Q80WC3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.5■□□□□ 0.87
Tnrc18Q80WC3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Tnrc18Q80WC3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tnrc18Q80WC3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tnrc18Q80WC3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tnrc18Q80WC3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tnrc18Q80WC3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
Tnrc18Q80WC3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.49■□□□□ 0.87
Tnrc18Q80WC3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.49■□□□□ 0.87
Tnrc18Q80WC3 Gm22240-201ENSMUST00000175225 82 ntBASIC20.48■□□□□ 0.87
Tnrc18Q80WC3 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Tnrc18Q80WC3 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Tnrc18Q80WC3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Tnrc18Q80WC3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tnrc18Q80WC3 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.48■□□□□ 0.87
Tnrc18Q80WC3 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.48■□□□□ 0.87
Tnrc18Q80WC3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tnrc18Q80WC3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tnrc18Q80WC3 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tnrc18Q80WC3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tnrc18Q80WC3 Gm27801-201ENSMUST00000184174 223 ntBASIC20.47■□□□□ 0.87
Tnrc18Q80WC3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tnrc18Q80WC3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tnrc18Q80WC3 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tnrc18Q80WC3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tnrc18Q80WC3 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.47■□□□□ 0.87
Tnrc18Q80WC3 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Tnrc18Q80WC3 Gm20760-201ENSMUST00000179197 648 ntBASIC20.47■□□□□ 0.87
Tnrc18Q80WC3 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.47■□□□□ 0.87
Tnrc18Q80WC3 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Tnrc18Q80WC3 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
Tnrc18Q80WC3 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Tnrc18Q80WC3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tnrc18Q80WC3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tnrc18Q80WC3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tnrc18Q80WC3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Tnrc18Q80WC3 Mir5133-201ENSMUST00000174955 77 ntBASIC20.46■□□□□ 0.87
Tnrc18Q80WC3 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tnrc18Q80WC3 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.46■□□□□ 0.87
Tnrc18Q80WC3 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tnrc18Q80WC3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tnrc18Q80WC3 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tnrc18Q80WC3 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Tnrc18Q80WC3 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Tnrc18Q80WC3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tnrc18Q80WC3 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.45■□□□□ 0.86
Tnrc18Q80WC3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tnrc18Q80WC3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Tnrc18Q80WC3 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tnrc18Q80WC3 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tnrc18Q80WC3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tnrc18Q80WC3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tnrc18Q80WC3 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.44■□□□□ 0.86
Tnrc18Q80WC3 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tnrc18Q80WC3 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tnrc18Q80WC3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tnrc18Q80WC3 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.44■□□□□ 0.86
Tnrc18Q80WC3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tnrc18Q80WC3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Tnrc18Q80WC3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tnrc18Q80WC3 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tnrc18Q80WC3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.43■□□□□ 0.86
Tnrc18Q80WC3 Mir7071-201ENSMUST00000184847 69 ntBASIC20.43■□□□□ 0.86
Tnrc18Q80WC3 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tnrc18Q80WC3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Tnrc18Q80WC3 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tnrc18Q80WC3 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Tnrc18Q80WC3 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.42■□□□□ 0.86
Tnrc18Q80WC3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.42■□□□□ 0.86
Tnrc18Q80WC3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Tnrc18Q80WC3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Tnrc18Q80WC3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.42■□□□□ 0.86
Tnrc18Q80WC3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tnrc18Q80WC3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Tnrc18Q80WC3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnrc18Q80WC3 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.41■□□□□ 0.86
Tnrc18Q80WC3 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnrc18Q80WC3 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnrc18Q80WC3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tnrc18Q80WC3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.41■□□□□ 0.86
Tnrc18Q80WC3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Tnrc18Q80WC3 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnrc18Q80WC3 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnrc18Q80WC3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnrc18Q80WC3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tnrc18Q80WC3 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Tnrc18Q80WC3 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms