Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Otop1Q80VM9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.32■□□□□ 0.68
Otop1Q80VM9 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Otop1Q80VM9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Otop1Q80VM9 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Otop1Q80VM9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Otop1Q80VM9 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
Otop1Q80VM9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.31■□□□□ 0.68
Otop1Q80VM9 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Otop1Q80VM9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.31■□□□□ 0.68
Otop1Q80VM9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Otop1Q80VM9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Otop1Q80VM9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Otop1Q80VM9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Otop1Q80VM9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Otop1Q80VM9 AV356131-201ENSMUST00000206201 750 ntBASIC19.3■□□□□ 0.68
Otop1Q80VM9 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Otop1Q80VM9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Otop1Q80VM9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Otop1Q80VM9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Otop1Q80VM9 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Otop1Q80VM9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Otop1Q80VM9 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Otop1Q80VM9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Otop1Q80VM9 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.29■□□□□ 0.68
Otop1Q80VM9 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Otop1Q80VM9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Otop1Q80VM9 Gm10033-202ENSMUST00000211874 928 ntBASIC19.29■□□□□ 0.68
Otop1Q80VM9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Otop1Q80VM9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Otop1Q80VM9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Otop1Q80VM9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.29■□□□□ 0.68
Otop1Q80VM9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Otop1Q80VM9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Otop1Q80VM9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Otop1Q80VM9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Otop1Q80VM9 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Otop1Q80VM9 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.28■□□□□ 0.68
Otop1Q80VM9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.28■□□□□ 0.68
Otop1Q80VM9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Otop1Q80VM9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Otop1Q80VM9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Otop1Q80VM9 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Otop1Q80VM9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Otop1Q80VM9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.27■□□□□ 0.68
Otop1Q80VM9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Otop1Q80VM9 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.27■□□□□ 0.68
Otop1Q80VM9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.27■□□□□ 0.68
Otop1Q80VM9 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Otop1Q80VM9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Otop1Q80VM9 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Otop1Q80VM9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Otop1Q80VM9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Otop1Q80VM9 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Otop1Q80VM9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.26■□□□□ 0.67
Otop1Q80VM9 Gm42778-201ENSMUST00000199644 553 ntBASIC19.26■□□□□ 0.67
Otop1Q80VM9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Otop1Q80VM9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Otop1Q80VM9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.26■□□□□ 0.67
Otop1Q80VM9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Otop1Q80VM9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Otop1Q80VM9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Otop1Q80VM9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Otop1Q80VM9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Otop1Q80VM9 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Otop1Q80VM9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.25■□□□□ 0.67
Otop1Q80VM9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Otop1Q80VM9 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Otop1Q80VM9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Otop1Q80VM9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Otop1Q80VM9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Otop1Q80VM9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Otop1Q80VM9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Otop1Q80VM9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Otop1Q80VM9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Otop1Q80VM9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Otop1Q80VM9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Otop1Q80VM9 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Otop1Q80VM9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Otop1Q80VM9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Otop1Q80VM9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.24■□□□□ 0.67
Otop1Q80VM9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Otop1Q80VM9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Otop1Q80VM9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Otop1Q80VM9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.23■□□□□ 0.67
Otop1Q80VM9 Notumos-201ENSMUST00000151998 2659 ntBASIC19.23■□□□□ 0.67
Otop1Q80VM9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Otop1Q80VM9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Otop1Q80VM9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Otop1Q80VM9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Otop1Q80VM9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Otop1Q80VM9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Otop1Q80VM9 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.22■□□□□ 0.67
Otop1Q80VM9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Otop1Q80VM9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Otop1Q80VM9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.22■□□□□ 0.67
Otop1Q80VM9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Otop1Q80VM9 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Otop1Q80VM9 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.22■□□□□ 0.67
Otop1Q80VM9 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms