Protein–RNA interactions for Protein: Q80UY2

Kcmf1, E3 ubiquitin-protein ligase KCMF1, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcmf1Q80UY2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Kcmf1Q80UY2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Kcmf1Q80UY2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Kcmf1Q80UY2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Kcmf1Q80UY2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Kcmf1Q80UY2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
Kcmf1Q80UY2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Kcmf1Q80UY2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Kcmf1Q80UY2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Kcmf1Q80UY2 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Kcmf1Q80UY2 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Kcmf1Q80UY2 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.96■□□□□ 0.63
Kcmf1Q80UY2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Kcmf1Q80UY2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Kcmf1Q80UY2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Kcmf1Q80UY2 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Kcmf1Q80UY2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Kcmf1Q80UY2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Kcmf1Q80UY2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Kcmf1Q80UY2 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Kcmf1Q80UY2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.95■□□□□ 0.62
Kcmf1Q80UY2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Kcmf1Q80UY2 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Kcmf1Q80UY2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Kcmf1Q80UY2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Kcmf1Q80UY2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Kcmf1Q80UY2 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Kcmf1Q80UY2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Kcmf1Q80UY2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Kcmf1Q80UY2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Kcmf1Q80UY2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Kcmf1Q80UY2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Kcmf1Q80UY2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Kcmf1Q80UY2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Kcmf1Q80UY2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Kcmf1Q80UY2 Gm21956-201ENSMUST00000179946 522 ntBASIC18.93■□□□□ 0.62
Kcmf1Q80UY2 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Kcmf1Q80UY2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Kcmf1Q80UY2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Kcmf1Q80UY2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Kcmf1Q80UY2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Kcmf1Q80UY2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Kcmf1Q80UY2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Kcmf1Q80UY2 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Kcmf1Q80UY2 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.92■□□□□ 0.62
Kcmf1Q80UY2 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Kcmf1Q80UY2 Gm13241-201ENSMUST00000094493 780 ntBASIC18.92■□□□□ 0.62
Kcmf1Q80UY2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.92■□□□□ 0.62
Kcmf1Q80UY2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Kcmf1Q80UY2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Kcmf1Q80UY2 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.91■□□□□ 0.62
Kcmf1Q80UY2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Kcmf1Q80UY2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.91■□□□□ 0.62
Kcmf1Q80UY2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Kcmf1Q80UY2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Kcmf1Q80UY2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Kcmf1Q80UY2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Kcmf1Q80UY2 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Kcmf1Q80UY2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Kcmf1Q80UY2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Kcmf1Q80UY2 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Kcmf1Q80UY2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Kcmf1Q80UY2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Kcmf1Q80UY2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Kcmf1Q80UY2 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Kcmf1Q80UY2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Kcmf1Q80UY2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Kcmf1Q80UY2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Kcmf1Q80UY2 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Kcmf1Q80UY2 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.62
Kcmf1Q80UY2 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Kcmf1Q80UY2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Kcmf1Q80UY2 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Kcmf1Q80UY2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Kcmf1Q80UY2 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Kcmf1Q80UY2 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Kcmf1Q80UY2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Kcmf1Q80UY2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Kcmf1Q80UY2 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Kcmf1Q80UY2 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Kcmf1Q80UY2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.89■□□□□ 0.61
Kcmf1Q80UY2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Kcmf1Q80UY2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Kcmf1Q80UY2 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Kcmf1Q80UY2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Kcmf1Q80UY2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.88■□□□□ 0.61
Kcmf1Q80UY2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Kcmf1Q80UY2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.88■□□□□ 0.61
Kcmf1Q80UY2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.88■□□□□ 0.61
Kcmf1Q80UY2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Kcmf1Q80UY2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Kcmf1Q80UY2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Kcmf1Q80UY2 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Kcmf1Q80UY2 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Kcmf1Q80UY2 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.87■□□□□ 0.61
Kcmf1Q80UY2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Kcmf1Q80UY2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.87■□□□□ 0.61
Kcmf1Q80UY2 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.87■□□□□ 0.61
Kcmf1Q80UY2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.87■□□□□ 0.61
Kcmf1Q80UY2 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms