Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh19Q80TF3 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.76■□□□□ 0.75
Pcdh19Q80TF3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh19Q80TF3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh19Q80TF3 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Pcdh19Q80TF3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pcdh19Q80TF3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh19Q80TF3 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh19Q80TF3 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Pcdh19Q80TF3 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Pcdh19Q80TF3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh19Q80TF3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh19Q80TF3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Pcdh19Q80TF3 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Pcdh19Q80TF3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.75■□□□□ 0.75
Pcdh19Q80TF3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.75■□□□□ 0.75
Pcdh19Q80TF3 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh19Q80TF3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh19Q80TF3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Pcdh19Q80TF3 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
Pcdh19Q80TF3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh19Q80TF3 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh19Q80TF3 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Pcdh19Q80TF3 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.74■□□□□ 0.75
Pcdh19Q80TF3 Spcs1-204ENSMUST00000226782 949 ntBASIC19.74■□□□□ 0.75
Pcdh19Q80TF3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh19Q80TF3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdh19Q80TF3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh19Q80TF3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Pcdh19Q80TF3 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh19Q80TF3 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh19Q80TF3 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Pcdh19Q80TF3 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh19Q80TF3 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh19Q80TF3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdh19Q80TF3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh19Q80TF3 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh19Q80TF3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh19Q80TF3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Pcdh19Q80TF3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh19Q80TF3 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Pcdh19Q80TF3 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.72■□□□□ 0.75
Pcdh19Q80TF3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdh19Q80TF3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Pcdh19Q80TF3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh19Q80TF3 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh19Q80TF3 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh19Q80TF3 Gm12251-201ENSMUST00000117893 792 ntBASIC19.71■□□□□ 0.75
Pcdh19Q80TF3 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.71■□□□□ 0.75
Pcdh19Q80TF3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdh19Q80TF3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Pcdh19Q80TF3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.71■□□□□ 0.74
Pcdh19Q80TF3 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh19Q80TF3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh19Q80TF3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh19Q80TF3 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh19Q80TF3 Mir6236-201ENSMUST00000184437 123 ntBASIC19.7■□□□□ 0.74
Pcdh19Q80TF3 Gm43173-201ENSMUST00000202246 593 ntBASIC19.7■□□□□ 0.74
Pcdh19Q80TF3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh19Q80TF3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdh19Q80TF3 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.7■□□□□ 0.74
Pcdh19Q80TF3 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh19Q80TF3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh19Q80TF3 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh19Q80TF3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh19Q80TF3 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh19Q80TF3 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh19Q80TF3 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.69■□□□□ 0.74
Pcdh19Q80TF3 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Pcdh19Q80TF3 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh19Q80TF3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Pcdh19Q80TF3 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh19Q80TF3 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh19Q80TF3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Pcdh19Q80TF3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh19Q80TF3 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.68■□□□□ 0.74
Pcdh19Q80TF3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh19Q80TF3 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.68■□□□□ 0.74
Pcdh19Q80TF3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh19Q80TF3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh19Q80TF3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.68■□□□□ 0.74
Pcdh19Q80TF3 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh19Q80TF3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh19Q80TF3 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh19Q80TF3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh19Q80TF3 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh19Q80TF3 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
Pcdh19Q80TF3 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh19Q80TF3 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh19Q80TF3 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh19Q80TF3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh19Q80TF3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh19Q80TF3 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh19Q80TF3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Pcdh19Q80TF3 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh19Q80TF3 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Pcdh19Q80TF3 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh19Q80TF3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh19Q80TF3 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh19Q80TF3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms