Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC22.05■■□□□ 1.12
Ush1gQ80T11 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ush1gQ80T11 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Ush1gQ80T11 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Ush1gQ80T11 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ush1gQ80T11 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Ush1gQ80T11 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC22.04■■□□□ 1.12
Ush1gQ80T11 Gm43060-201ENSMUST00000200621 289 ntBASIC22.04■■□□□ 1.12
Ush1gQ80T11 Gm10493-201ENSMUST00000097270 612 ntBASIC22.04■■□□□ 1.12
Ush1gQ80T11 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ush1gQ80T11 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Ush1gQ80T11 Spcs1-204ENSMUST00000226782 949 ntBASIC22.03■■□□□ 1.12
Ush1gQ80T11 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Ush1gQ80T11 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ush1gQ80T11 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Ush1gQ80T11 AC166356.1-201ENSMUST00000228236 1426 ntBASIC22.03■■□□□ 1.12
Ush1gQ80T11 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ush1gQ80T11 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ush1gQ80T11 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Ush1gQ80T11 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ush1gQ80T11 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ush1gQ80T11 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Ush1gQ80T11 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ush1gQ80T11 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Ush1gQ80T11 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Ush1gQ80T11 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ush1gQ80T11 Gm13042-201ENSMUST00000119244 1955 ntBASIC22.01■■□□□ 1.11
Ush1gQ80T11 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ush1gQ80T11 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC22.01■■□□□ 1.11
Ush1gQ80T11 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ush1gQ80T11 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC22.01■■□□□ 1.11
Ush1gQ80T11 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ush1gQ80T11 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC22.01■■□□□ 1.11
Ush1gQ80T11 Gm43530-201ENSMUST00000195920 274 ntBASIC22.01■■□□□ 1.11
Ush1gQ80T11 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC22.01■■□□□ 1.11
Ush1gQ80T11 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC22.01■■□□□ 1.11
Ush1gQ80T11 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ush1gQ80T11 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.01■■□□□ 1.11
Ush1gQ80T11 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Ush1gQ80T11 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC22■■□□□ 1.11
Ush1gQ80T11 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ush1gQ80T11 Gm42569-201ENSMUST00000200539 472 ntBASIC22■■□□□ 1.11
Ush1gQ80T11 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC22■■□□□ 1.11
Ush1gQ80T11 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ush1gQ80T11 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ush1gQ80T11 Gm6085-201ENSMUST00000182774 1470 ntBASIC22■■□□□ 1.11
Ush1gQ80T11 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ush1gQ80T11 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Ush1gQ80T11 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ush1gQ80T11 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ush1gQ80T11 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Ush1gQ80T11 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Ush1gQ80T11 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ush1gQ80T11 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.99■■□□□ 1.11
Ush1gQ80T11 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ush1gQ80T11 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ush1gQ80T11 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ush1gQ80T11 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ush1gQ80T11 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ush1gQ80T11 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ush1gQ80T11 Gm27405-201ENSMUST00000184201 112 ntBASIC21.98■■□□□ 1.11
Ush1gQ80T11 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.98■■□□□ 1.11
Ush1gQ80T11 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ush1gQ80T11 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ush1gQ80T11 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ush1gQ80T11 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ush1gQ80T11 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ush1gQ80T11 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ush1gQ80T11 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ush1gQ80T11 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.97■■□□□ 1.11
Ush1gQ80T11 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Ush1gQ80T11 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ush1gQ80T11 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ush1gQ80T11 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.97■■□□□ 1.11
Ush1gQ80T11 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ush1gQ80T11 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.96■■□□□ 1.11
Ush1gQ80T11 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.96■■□□□ 1.11
Ush1gQ80T11 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.96■■□□□ 1.11
Ush1gQ80T11 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.96■■□□□ 1.11
Ush1gQ80T11 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Ush1gQ80T11 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ush1gQ80T11 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Ush1gQ80T11 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ush1gQ80T11 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ush1gQ80T11 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Ush1gQ80T11 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ush1gQ80T11 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ush1gQ80T11 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.95■■□□□ 1.1
Ush1gQ80T11 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.95■■□□□ 1.1
Ush1gQ80T11 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ush1gQ80T11 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ush1gQ80T11 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Ush1gQ80T11 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ush1gQ80T11 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.95■■□□□ 1.1
Ush1gQ80T11 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ush1gQ80T11 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ush1gQ80T11 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.95■■□□□ 1.1
Ush1gQ80T11 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ush1gQ80T11 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ush1gQ80T11 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.94■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms