Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ddx58Q6Q899 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ddx58Q6Q899 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC25.06■■□□□ 1.6
Ddx58Q6Q899 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ddx58Q6Q899 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ddx58Q6Q899 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Ddx58Q6Q899 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ddx58Q6Q899 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ddx58Q6Q899 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC25.05■■□□□ 1.6
Ddx58Q6Q899 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Ddx58Q6Q899 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ddx58Q6Q899 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ddx58Q6Q899 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ddx58Q6Q899 Gm8495-201ENSMUST00000188740 694 ntBASIC25.04■■□□□ 1.6
Ddx58Q6Q899 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ddx58Q6Q899 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ddx58Q6Q899 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ddx58Q6Q899 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ddx58Q6Q899 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Ddx58Q6Q899 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC25.03■■□□□ 1.6
Ddx58Q6Q899 Smad6-203ENSMUST00000179458 273 ntBASIC25.03■■□□□ 1.6
Ddx58Q6Q899 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC25.03■■□□□ 1.6
Ddx58Q6Q899 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ddx58Q6Q899 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
Ddx58Q6Q899 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ddx58Q6Q899 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ddx58Q6Q899 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ddx58Q6Q899 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ddx58Q6Q899 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC25.02■■□□□ 1.6
Ddx58Q6Q899 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
Ddx58Q6Q899 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ddx58Q6Q899 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ddx58Q6Q899 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ddx58Q6Q899 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC25.01■■□□□ 1.59
Ddx58Q6Q899 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ddx58Q6Q899 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
Ddx58Q6Q899 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Ddx58Q6Q899 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC25.01■■□□□ 1.59
Ddx58Q6Q899 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Ddx58Q6Q899 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
Ddx58Q6Q899 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ddx58Q6Q899 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC25.01■■□□□ 1.59
Ddx58Q6Q899 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Ddx58Q6Q899 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
Ddx58Q6Q899 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Ddx58Q6Q899 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Ddx58Q6Q899 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
Ddx58Q6Q899 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Ddx58Q6Q899 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
Ddx58Q6Q899 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Ddx58Q6Q899 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
Ddx58Q6Q899 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Ddx58Q6Q899 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Ddx58Q6Q899 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC24.99■■□□□ 1.59
Ddx58Q6Q899 Gm43060-201ENSMUST00000200621 289 ntBASIC24.99■■□□□ 1.59
Ddx58Q6Q899 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Ddx58Q6Q899 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Ddx58Q6Q899 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
Ddx58Q6Q899 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Ddx58Q6Q899 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Ddx58Q6Q899 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
Ddx58Q6Q899 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ddx58Q6Q899 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ddx58Q6Q899 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Ddx58Q6Q899 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ddx58Q6Q899 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC24.98■■□□□ 1.59
Ddx58Q6Q899 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC24.98■■□□□ 1.59
Ddx58Q6Q899 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Ddx58Q6Q899 AC165080.2-201ENSMUST00000217491 1530 ntBASIC24.97■■□□□ 1.59
Ddx58Q6Q899 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC24.97■■□□□ 1.59
Ddx58Q6Q899 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ddx58Q6Q899 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ddx58Q6Q899 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ddx58Q6Q899 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC24.97■■□□□ 1.59
Ddx58Q6Q899 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ddx58Q6Q899 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
Ddx58Q6Q899 Gm12504-201ENSMUST00000120860 2231 ntBASIC24.97■■□□□ 1.59
Ddx58Q6Q899 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ddx58Q6Q899 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ddx58Q6Q899 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
Ddx58Q6Q899 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ddx58Q6Q899 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Ddx58Q6Q899 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ddx58Q6Q899 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ddx58Q6Q899 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC24.96■■□□□ 1.59
Ddx58Q6Q899 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ddx58Q6Q899 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ddx58Q6Q899 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Ddx58Q6Q899 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC24.96■■□□□ 1.59
Ddx58Q6Q899 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ddx58Q6Q899 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Ddx58Q6Q899 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC24.95■■□□□ 1.59
Ddx58Q6Q899 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Ddx58Q6Q899 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Ddx58Q6Q899 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Ddx58Q6Q899 Gm40848-201ENSMUST00000221998 324 ntBASIC24.95■■□□□ 1.58
Ddx58Q6Q899 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Ddx58Q6Q899 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Ddx58Q6Q899 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Ddx58Q6Q899 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC24.95■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms