Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sdc3Q64519 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Sdc3Q64519 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sdc3Q64519 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.25■□□□□ 0.67
Sdc3Q64519 Gm43137-201ENSMUST00000198052 594 ntBASIC19.25■□□□□ 0.67
Sdc3Q64519 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sdc3Q64519 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
Sdc3Q64519 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sdc3Q64519 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sdc3Q64519 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Sdc3Q64519 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sdc3Q64519 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sdc3Q64519 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sdc3Q64519 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Sdc3Q64519 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sdc3Q64519 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.24■□□□□ 0.67
Sdc3Q64519 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.24■□□□□ 0.67
Sdc3Q64519 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sdc3Q64519 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sdc3Q64519 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Sdc3Q64519 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sdc3Q64519 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sdc3Q64519 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sdc3Q64519 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Sdc3Q64519 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sdc3Q64519 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Sdc3Q64519 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sdc3Q64519 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.23■□□□□ 0.67
Sdc3Q64519 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Sdc3Q64519 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sdc3Q64519 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sdc3Q64519 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.23■□□□□ 0.67
Sdc3Q64519 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sdc3Q64519 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sdc3Q64519 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sdc3Q64519 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sdc3Q64519 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sdc3Q64519 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sdc3Q64519 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sdc3Q64519 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sdc3Q64519 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sdc3Q64519 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sdc3Q64519 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sdc3Q64519 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sdc3Q64519 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sdc3Q64519 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Sdc3Q64519 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sdc3Q64519 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sdc3Q64519 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.21■□□□□ 0.67
Sdc3Q64519 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sdc3Q64519 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sdc3Q64519 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sdc3Q64519 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sdc3Q64519 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sdc3Q64519 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sdc3Q64519 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sdc3Q64519 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.21■□□□□ 0.67
Sdc3Q64519 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sdc3Q64519 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sdc3Q64519 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sdc3Q64519 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sdc3Q64519 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sdc3Q64519 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sdc3Q64519 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.2■□□□□ 0.66
Sdc3Q64519 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sdc3Q64519 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sdc3Q64519 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sdc3Q64519 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sdc3Q64519 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sdc3Q64519 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sdc3Q64519 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Sdc3Q64519 Gm43530-201ENSMUST00000195920 274 ntBASIC19.19■□□□□ 0.66
Sdc3Q64519 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sdc3Q64519 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sdc3Q64519 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sdc3Q64519 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sdc3Q64519 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Sdc3Q64519 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sdc3Q64519 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.19■□□□□ 0.66
Sdc3Q64519 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Sdc3Q64519 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sdc3Q64519 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sdc3Q64519 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sdc3Q64519 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Sdc3Q64519 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sdc3Q64519 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.18■□□□□ 0.66
Sdc3Q64519 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Sdc3Q64519 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sdc3Q64519 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sdc3Q64519 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sdc3Q64519 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sdc3Q64519 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sdc3Q64519 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sdc3Q64519 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.17■□□□□ 0.66
Sdc3Q64519 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sdc3Q64519 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sdc3Q64519 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.17■□□□□ 0.66
Sdc3Q64519 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sdc3Q64519 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Sdc3Q64519 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms