Protein–RNA interactions for Protein: Q62261

Sptbn1, Spectrin beta chain, non-erythrocytic 1, mousemouse

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn1Q62261 Gm27801-201ENSMUST00000184174 223 ntBASIC17.21■□□□□ 0.35
Sptbn1Q62261 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sptbn1Q62261 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Sptbn1Q62261 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sptbn1Q62261 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Sptbn1Q62261 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sptbn1Q62261 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sptbn1Q62261 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Sptbn1Q62261 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sptbn1Q62261 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sptbn1Q62261 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sptbn1Q62261 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sptbn1Q62261 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sptbn1Q62261 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Sptbn1Q62261 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sptbn1Q62261 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.2■□□□□ 0.34
Sptbn1Q62261 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.2■□□□□ 0.34
Sptbn1Q62261 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.19■□□□□ 0.34
Sptbn1Q62261 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sptbn1Q62261 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sptbn1Q62261 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sptbn1Q62261 Gm11421-201ENSMUST00000122124 294 ntBASIC17.19■□□□□ 0.34
Sptbn1Q62261 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.19■□□□□ 0.34
Sptbn1Q62261 Gm20760-201ENSMUST00000179197 648 ntBASIC17.19■□□□□ 0.34
Sptbn1Q62261 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sptbn1Q62261 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Sptbn1Q62261 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sptbn1Q62261 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sptbn1Q62261 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Sptbn1Q62261 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.18■□□□□ 0.34
Sptbn1Q62261 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.18■□□□□ 0.34
Sptbn1Q62261 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sptbn1Q62261 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sptbn1Q62261 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sptbn1Q62261 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sptbn1Q62261 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Sptbn1Q62261 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Sptbn1Q62261 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.18■□□□□ 0.34
Sptbn1Q62261 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sptbn1Q62261 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sptbn1Q62261 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sptbn1Q62261 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
Sptbn1Q62261 Gm13148-201ENSMUST00000118892 745 ntBASIC17.17■□□□□ 0.34
Sptbn1Q62261 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sptbn1Q62261 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.17■□□□□ 0.34
Sptbn1Q62261 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sptbn1Q62261 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.17■□□□□ 0.34
Sptbn1Q62261 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.17■□□□□ 0.34
Sptbn1Q62261 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sptbn1Q62261 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sptbn1Q62261 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sptbn1Q62261 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Sptbn1Q62261 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sptbn1Q62261 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sptbn1Q62261 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sptbn1Q62261 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sptbn1Q62261 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sptbn1Q62261 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sptbn1Q62261 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sptbn1Q62261 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sptbn1Q62261 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Sptbn1Q62261 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Sptbn1Q62261 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Sptbn1Q62261 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sptbn1Q62261 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sptbn1Q62261 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sptbn1Q62261 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sptbn1Q62261 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sptbn1Q62261 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sptbn1Q62261 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.15■□□□□ 0.34
Sptbn1Q62261 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sptbn1Q62261 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sptbn1Q62261 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sptbn1Q62261 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sptbn1Q62261 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.15■□□□□ 0.34
Sptbn1Q62261 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Sptbn1Q62261 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Sptbn1Q62261 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sptbn1Q62261 Reep4-203ENSMUST00000226563 1444 ntBASIC17.14■□□□□ 0.33
Sptbn1Q62261 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sptbn1Q62261 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sptbn1Q62261 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Sptbn1Q62261 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Sptbn1Q62261 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.14■□□□□ 0.33
Sptbn1Q62261 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.14■□□□□ 0.33
Sptbn1Q62261 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sptbn1Q62261 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sptbn1Q62261 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sptbn1Q62261 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sptbn1Q62261 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sptbn1Q62261 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sptbn1Q62261 Gm8520-201ENSMUST00000186517 868 ntBASIC17.14■□□□□ 0.33
Sptbn1Q62261 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.14■□□□□ 0.33
Sptbn1Q62261 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sptbn1Q62261 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sptbn1Q62261 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sptbn1Q62261 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sptbn1Q62261 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Sptbn1Q62261 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.13■□□□□ 0.33
Sptbn1Q62261 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 188.1 ms