Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.73■□□□□ 0.27
SspnQ62147 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SspnQ62147 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SspnQ62147 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SspnQ62147 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.73■□□□□ 0.27
SspnQ62147 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SspnQ62147 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.73■□□□□ 0.27
SspnQ62147 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SspnQ62147 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SspnQ62147 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SspnQ62147 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SspnQ62147 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SspnQ62147 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SspnQ62147 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SspnQ62147 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SspnQ62147 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SspnQ62147 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.72■□□□□ 0.27
SspnQ62147 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.72■□□□□ 0.27
SspnQ62147 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SspnQ62147 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SspnQ62147 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SspnQ62147 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.72■□□□□ 0.27
SspnQ62147 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SspnQ62147 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SspnQ62147 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SspnQ62147 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.71■□□□□ 0.27
SspnQ62147 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.71■□□□□ 0.27
SspnQ62147 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
SspnQ62147 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SspnQ62147 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SspnQ62147 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.7■□□□□ 0.26
SspnQ62147 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.7■□□□□ 0.26
SspnQ62147 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SspnQ62147 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SspnQ62147 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SspnQ62147 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.7■□□□□ 0.26
SspnQ62147 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SspnQ62147 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SspnQ62147 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SspnQ62147 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SspnQ62147 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SspnQ62147 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
SspnQ62147 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SspnQ62147 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SspnQ62147 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SspnQ62147 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SspnQ62147 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SspnQ62147 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SspnQ62147 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SspnQ62147 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SspnQ62147 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SspnQ62147 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SspnQ62147 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SspnQ62147 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SspnQ62147 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SspnQ62147 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SspnQ62147 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.69■□□□□ 0.26
SspnQ62147 Gm40881-201ENSMUST00000223397 166 ntBASIC16.69■□□□□ 0.26
SspnQ62147 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.69■□□□□ 0.26
SspnQ62147 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SspnQ62147 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SspnQ62147 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SspnQ62147 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SspnQ62147 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SspnQ62147 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.68■□□□□ 0.26
SspnQ62147 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SspnQ62147 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SspnQ62147 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.68■□□□□ 0.26
SspnQ62147 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SspnQ62147 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SspnQ62147 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SspnQ62147 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.67■□□□□ 0.26
SspnQ62147 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
SspnQ62147 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SspnQ62147 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SspnQ62147 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.67■□□□□ 0.26
SspnQ62147 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.67■□□□□ 0.26
SspnQ62147 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.67■□□□□ 0.26
SspnQ62147 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SspnQ62147 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SspnQ62147 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SspnQ62147 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SspnQ62147 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SspnQ62147 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SspnQ62147 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SspnQ62147 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SspnQ62147 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SspnQ62147 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SspnQ62147 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.66■□□□□ 0.26
SspnQ62147 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SspnQ62147 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SspnQ62147 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SspnQ62147 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
SspnQ62147 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.66■□□□□ 0.26
SspnQ62147 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SspnQ62147 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SspnQ62147 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SspnQ62147 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SspnQ62147 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SspnQ62147 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms