Protein–RNA interactions for Protein: Q61575

Foxn1, Forkhead box protein N1, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxn1Q61575 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC23.23■■□□□ 1.31
Foxn1Q61575 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Foxn1Q61575 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Foxn1Q61575 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Foxn1Q61575 Gm27045-201ENSMUST00000182145 1402 ntBASIC23.23■■□□□ 1.31
Foxn1Q61575 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Foxn1Q61575 H3f3aos-201ENSMUST00000097448 2905 ntBASIC23.22■■□□□ 1.31
Foxn1Q61575 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Foxn1Q61575 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Foxn1Q61575 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Foxn1Q61575 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Foxn1Q61575 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Foxn1Q61575 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Foxn1Q61575 AC130671.1-201ENSMUST00000227384 1237 ntBASIC23.22■■□□□ 1.31
Foxn1Q61575 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Foxn1Q61575 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Foxn1Q61575 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Foxn1Q61575 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Foxn1Q61575 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC23.22■■□□□ 1.31
Foxn1Q61575 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Foxn1Q61575 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC23.21■■□□□ 1.31
Foxn1Q61575 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
Foxn1Q61575 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Foxn1Q61575 Mir6982-201ENSMUST00000184354 68 ntBASIC23.21■■□□□ 1.31
Foxn1Q61575 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Foxn1Q61575 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Foxn1Q61575 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Foxn1Q61575 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC23.2■■□□□ 1.3
Foxn1Q61575 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
Foxn1Q61575 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC23.2■■□□□ 1.3
Foxn1Q61575 Gm10812-201ENSMUST00000099864 546 ntBASIC23.2■■□□□ 1.3
Foxn1Q61575 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Foxn1Q61575 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Foxn1Q61575 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Foxn1Q61575 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Foxn1Q61575 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Foxn1Q61575 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Foxn1Q61575 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Foxn1Q61575 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Foxn1Q61575 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC23.18■■□□□ 1.3
Foxn1Q61575 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC23.18■■□□□ 1.3
Foxn1Q61575 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Foxn1Q61575 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Foxn1Q61575 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Foxn1Q61575 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Foxn1Q61575 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Foxn1Q61575 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Foxn1Q61575 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Foxn1Q61575 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Foxn1Q61575 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Foxn1Q61575 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC23.17■■□□□ 1.3
Foxn1Q61575 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Foxn1Q61575 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Foxn1Q61575 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Foxn1Q61575 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Foxn1Q61575 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Foxn1Q61575 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Foxn1Q61575 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Foxn1Q61575 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Foxn1Q61575 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Foxn1Q61575 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Foxn1Q61575 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC23.15■■□□□ 1.3
Foxn1Q61575 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Foxn1Q61575 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Foxn1Q61575 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
Foxn1Q61575 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Foxn1Q61575 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
Foxn1Q61575 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Foxn1Q61575 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Foxn1Q61575 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.29
Foxn1Q61575 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Foxn1Q61575 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Foxn1Q61575 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
Foxn1Q61575 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Foxn1Q61575 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Foxn1Q61575 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Foxn1Q61575 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC23.13■■□□□ 1.29
Foxn1Q61575 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Foxn1Q61575 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC23.13■■□□□ 1.29
Foxn1Q61575 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC23.13■■□□□ 1.29
Foxn1Q61575 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Foxn1Q61575 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Foxn1Q61575 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC23.13■■□□□ 1.29
Foxn1Q61575 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC23.12■■□□□ 1.29
Foxn1Q61575 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Foxn1Q61575 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC23.12■■□□□ 1.29
Foxn1Q61575 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Foxn1Q61575 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Foxn1Q61575 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Foxn1Q61575 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC23.12■■□□□ 1.29
Foxn1Q61575 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Foxn1Q61575 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Foxn1Q61575 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Foxn1Q61575 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Foxn1Q61575 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Foxn1Q61575 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Foxn1Q61575 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC23.1■■□□□ 1.29
Foxn1Q61575 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Foxn1Q61575 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Foxn1Q61575 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms