Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC14.62□□□□□ -0.07
Foxc1Q61572 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Foxc1Q61572 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Foxc1Q61572 Gm12922-201ENSMUST00000120626 809 ntBASIC14.62□□□□□ -0.07
Foxc1Q61572 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC14.62□□□□□ -0.07
Foxc1Q61572 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC14.62□□□□□ -0.07
Foxc1Q61572 Gm7143-201ENSMUST00000222811 859 ntBASIC14.62□□□□□ -0.07
Foxc1Q61572 Gm9870-201ENSMUST00000063874 645 ntBASIC14.62□□□□□ -0.07
Foxc1Q61572 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Foxc1Q61572 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Foxc1Q61572 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Foxc1Q61572 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC14.61□□□□□ -0.07
Foxc1Q61572 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Foxc1Q61572 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Foxc1Q61572 Gm12821-201ENSMUST00000120022 600 ntBASIC14.61□□□□□ -0.07
Foxc1Q61572 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Foxc1Q61572 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Foxc1Q61572 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Foxc1Q61572 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Foxc1Q61572 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Foxc1Q61572 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Foxc1Q61572 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Foxc1Q61572 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Foxc1Q61572 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Foxc1Q61572 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC14.6□□□□□ -0.07
Foxc1Q61572 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Foxc1Q61572 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
Foxc1Q61572 Gm21956-201ENSMUST00000179946 522 ntBASIC14.6□□□□□ -0.07
Foxc1Q61572 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Foxc1Q61572 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Foxc1Q61572 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC14.6□□□□□ -0.07
Foxc1Q61572 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Foxc1Q61572 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Foxc1Q61572 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Foxc1Q61572 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Foxc1Q61572 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Foxc1Q61572 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Foxc1Q61572 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC14.59□□□□□ -0.07
Foxc1Q61572 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Foxc1Q61572 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Foxc1Q61572 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Foxc1Q61572 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Foxc1Q61572 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Foxc1Q61572 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Foxc1Q61572 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Foxc1Q61572 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Foxc1Q61572 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Foxc1Q61572 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Foxc1Q61572 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Foxc1Q61572 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.58□□□□□ -0.08
Foxc1Q61572 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Foxc1Q61572 Gm42790-201ENSMUST00000201268 969 ntBASIC14.58□□□□□ -0.08
Foxc1Q61572 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC14.58□□□□□ -0.08
Foxc1Q61572 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC14.58□□□□□ -0.08
Foxc1Q61572 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Foxc1Q61572 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Foxc1Q61572 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Foxc1Q61572 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Foxc1Q61572 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Foxc1Q61572 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Foxc1Q61572 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
Foxc1Q61572 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Foxc1Q61572 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Foxc1Q61572 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Foxc1Q61572 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Foxc1Q61572 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC14.57□□□□□ -0.08
Foxc1Q61572 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC14.57□□□□□ -0.08
Foxc1Q61572 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC14.57□□□□□ -0.08
Foxc1Q61572 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC14.57□□□□□ -0.08
Foxc1Q61572 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Foxc1Q61572 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC14.57□□□□□ -0.08
Foxc1Q61572 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Foxc1Q61572 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.57□□□□□ -0.08
Foxc1Q61572 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Foxc1Q61572 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Foxc1Q61572 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Foxc1Q61572 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Foxc1Q61572 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.57□□□□□ -0.08
Foxc1Q61572 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Foxc1Q61572 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Foxc1Q61572 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Foxc1Q61572 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Foxc1Q61572 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Foxc1Q61572 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Foxc1Q61572 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Foxc1Q61572 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Foxc1Q61572 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Foxc1Q61572 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
Foxc1Q61572 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Foxc1Q61572 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Foxc1Q61572 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC14.56□□□□□ -0.08
Foxc1Q61572 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC14.56□□□□□ -0.08
Foxc1Q61572 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Foxc1Q61572 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Foxc1Q61572 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Foxc1Q61572 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Foxc1Q61572 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Foxc1Q61572 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Foxc1Q61572 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Foxc1Q61572 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms