Protein–RNA interactions for Protein: Q61467

Zic4, Zinc finger protein ZIC 4, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic4Q61467 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Zic4Q61467 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Zic4Q61467 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Zic4Q61467 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.34■□□□□ 0.21
Zic4Q61467 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Zic4Q61467 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Zic4Q61467 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Zic4Q61467 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Zic4Q61467 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Zic4Q61467 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Zic4Q61467 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.33■□□□□ 0.2
Zic4Q61467 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Zic4Q61467 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.33■□□□□ 0.2
Zic4Q61467 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Zic4Q61467 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Zic4Q61467 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Zic4Q61467 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Zic4Q61467 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Zic4Q61467 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Zic4Q61467 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Zic4Q61467 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC16.32■□□□□ 0.2
Zic4Q61467 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Zic4Q61467 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Zic4Q61467 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Zic4Q61467 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Zic4Q61467 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Zic4Q61467 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zic4Q61467 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Zic4Q61467 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zic4Q61467 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Zic4Q61467 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zic4Q61467 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zic4Q61467 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zic4Q61467 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zic4Q61467 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zic4Q61467 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Zic4Q61467 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zic4Q61467 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zic4Q61467 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zic4Q61467 Gm11687-201ENSMUST00000118911 886 ntBASIC16.31■□□□□ 0.2
Zic4Q61467 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.31■□□□□ 0.2
Zic4Q61467 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zic4Q61467 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Zic4Q61467 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zic4Q61467 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zic4Q61467 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zic4Q61467 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Zic4Q61467 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zic4Q61467 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zic4Q61467 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zic4Q61467 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zic4Q61467 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zic4Q61467 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zic4Q61467 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zic4Q61467 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Zic4Q61467 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zic4Q61467 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zic4Q61467 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zic4Q61467 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zic4Q61467 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Zic4Q61467 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zic4Q61467 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zic4Q61467 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Zic4Q61467 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Zic4Q61467 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zic4Q61467 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zic4Q61467 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.29■□□□□ 0.2
Zic4Q61467 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zic4Q61467 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zic4Q61467 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zic4Q61467 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zic4Q61467 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zic4Q61467 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Zic4Q61467 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zic4Q61467 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zic4Q61467 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Zic4Q61467 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zic4Q61467 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zic4Q61467 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Zic4Q61467 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Zic4Q61467 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zic4Q61467 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zic4Q61467 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zic4Q61467 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Zic4Q61467 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.28■□□□□ 0.2
Zic4Q61467 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Zic4Q61467 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zic4Q61467 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zic4Q61467 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zic4Q61467 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zic4Q61467 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Zic4Q61467 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Zic4Q61467 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.27■□□□□ 0.2
Zic4Q61467 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Zic4Q61467 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Zic4Q61467 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Zic4Q61467 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Zic4Q61467 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Zic4Q61467 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Zic4Q61467 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms