Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vsx2Q61412 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vsx2Q61412 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.5■□□□□ 0.71
Vsx2Q61412 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vsx2Q61412 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vsx2Q61412 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Vsx2Q61412 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vsx2Q61412 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vsx2Q61412 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.49■□□□□ 0.71
Vsx2Q61412 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.49■□□□□ 0.71
Vsx2Q61412 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Vsx2Q61412 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.49■□□□□ 0.71
Vsx2Q61412 Gm13241-201ENSMUST00000094493 780 ntBASIC19.49■□□□□ 0.71
Vsx2Q61412 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vsx2Q61412 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.48■□□□□ 0.71
Vsx2Q61412 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.48■□□□□ 0.71
Vsx2Q61412 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.48■□□□□ 0.71
Vsx2Q61412 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Vsx2Q61412 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.48■□□□□ 0.71
Vsx2Q61412 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vsx2Q61412 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vsx2Q61412 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Vsx2Q61412 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Vsx2Q61412 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vsx2Q61412 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Vsx2Q61412 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Vsx2Q61412 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Vsx2Q61412 Gm7143-201ENSMUST00000222811 859 ntBASIC19.47■□□□□ 0.71
Vsx2Q61412 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vsx2Q61412 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vsx2Q61412 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vsx2Q61412 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Vsx2Q61412 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Vsx2Q61412 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vsx2Q61412 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vsx2Q61412 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.46■□□□□ 0.71
Vsx2Q61412 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vsx2Q61412 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.46■□□□□ 0.71
Vsx2Q61412 Golgb1-201ENSMUST00000023534 498 ntBASIC19.46■□□□□ 0.71
Vsx2Q61412 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Vsx2Q61412 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vsx2Q61412 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vsx2Q61412 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vsx2Q61412 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.45■□□□□ 0.7
Vsx2Q61412 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Vsx2Q61412 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vsx2Q61412 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.45■□□□□ 0.7
Vsx2Q61412 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Vsx2Q61412 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.45■□□□□ 0.7
Vsx2Q61412 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vsx2Q61412 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.44■□□□□ 0.7
Vsx2Q61412 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Vsx2Q61412 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vsx2Q61412 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
Vsx2Q61412 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Vsx2Q61412 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Vsx2Q61412 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vsx2Q61412 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vsx2Q61412 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vsx2Q61412 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vsx2Q61412 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vsx2Q61412 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vsx2Q61412 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vsx2Q61412 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vsx2Q61412 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vsx2Q61412 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vsx2Q61412 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.43■□□□□ 0.7
Vsx2Q61412 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vsx2Q61412 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vsx2Q61412 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vsx2Q61412 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Vsx2Q61412 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vsx2Q61412 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vsx2Q61412 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Vsx2Q61412 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Vsx2Q61412 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Vsx2Q61412 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vsx2Q61412 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vsx2Q61412 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Vsx2Q61412 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vsx2Q61412 Gm21956-201ENSMUST00000179946 522 ntBASIC19.42■□□□□ 0.7
Vsx2Q61412 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vsx2Q61412 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vsx2Q61412 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vsx2Q61412 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vsx2Q61412 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vsx2Q61412 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vsx2Q61412 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.41■□□□□ 0.7
Vsx2Q61412 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.41■□□□□ 0.7
Vsx2Q61412 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Vsx2Q61412 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vsx2Q61412 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vsx2Q61412 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vsx2Q61412 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vsx2Q61412 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vsx2Q61412 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vsx2Q61412 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vsx2Q61412 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vsx2Q61412 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Vsx2Q61412 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms