Protein–RNA interactions for Protein: Q61120

Shc3, SHC-transforming protein 3, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc3Q61120 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Shc3Q61120 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Shc3Q61120 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shc3Q61120 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shc3Q61120 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Shc3Q61120 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Shc3Q61120 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Shc3Q61120 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Shc3Q61120 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Shc3Q61120 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Shc3Q61120 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Shc3Q61120 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Shc3Q61120 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.71■■□□□ 1.07
Shc3Q61120 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
Shc3Q61120 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Shc3Q61120 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shc3Q61120 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.7■■□□□ 1.06
Shc3Q61120 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Shc3Q61120 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shc3Q61120 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Shc3Q61120 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Shc3Q61120 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Shc3Q61120 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Shc3Q61120 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.69■■□□□ 1.06
Shc3Q61120 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Shc3Q61120 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.69■■□□□ 1.06
Shc3Q61120 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Shc3Q61120 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Shc3Q61120 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Shc3Q61120 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Shc3Q61120 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.68■■□□□ 1.06
Shc3Q61120 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Shc3Q61120 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Shc3Q61120 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Shc3Q61120 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Shc3Q61120 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Shc3Q61120 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Shc3Q61120 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Shc3Q61120 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.67■■□□□ 1.06
Shc3Q61120 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Shc3Q61120 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Shc3Q61120 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Shc3Q61120 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Shc3Q61120 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.67■■□□□ 1.06
Shc3Q61120 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Shc3Q61120 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.67■■□□□ 1.06
Shc3Q61120 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Shc3Q61120 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Shc3Q61120 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Shc3Q61120 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Shc3Q61120 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Shc3Q61120 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Shc3Q61120 Gm15820-201ENSMUST00000201566 728 ntBASIC21.66■■□□□ 1.06
Shc3Q61120 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Shc3Q61120 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Shc3Q61120 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Shc3Q61120 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.65■■□□□ 1.06
Shc3Q61120 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.65■■□□□ 1.06
Shc3Q61120 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Shc3Q61120 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Shc3Q61120 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Shc3Q61120 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Shc3Q61120 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Shc3Q61120 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Shc3Q61120 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
Shc3Q61120 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Shc3Q61120 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Shc3Q61120 Iqck-206ENSMUST00000208658 2891 ntBASIC21.63■■□□□ 1.05
Shc3Q61120 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Shc3Q61120 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Shc3Q61120 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Shc3Q61120 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.63■■□□□ 1.05
Shc3Q61120 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Shc3Q61120 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Shc3Q61120 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Shc3Q61120 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Shc3Q61120 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Shc3Q61120 Gm5812-201ENSMUST00000061073 957 ntBASIC21.62■■□□□ 1.05
Shc3Q61120 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Shc3Q61120 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Shc3Q61120 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Shc3Q61120 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Shc3Q61120 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Shc3Q61120 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Shc3Q61120 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Shc3Q61120 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Shc3Q61120 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.61■■□□□ 1.05
Shc3Q61120 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.61■■□□□ 1.05
Shc3Q61120 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.61■■□□□ 1.05
Shc3Q61120 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Shc3Q61120 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Shc3Q61120 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
Shc3Q61120 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Shc3Q61120 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.61■■□□□ 1.05
Shc3Q61120 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Shc3Q61120 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Shc3Q61120 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Shc3Q61120 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Shc3Q61120 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Shc3Q61120 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms