Protein–RNA interactions for Protein: Q61080

Foxf1, Forkhead box protein F1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxf1Q61080 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Foxf1Q61080 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Foxf1Q61080 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Foxf1Q61080 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Foxf1Q61080 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.83■□□□□ 0.28
Foxf1Q61080 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Foxf1Q61080 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.83■□□□□ 0.28
Foxf1Q61080 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Foxf1Q61080 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.83■□□□□ 0.28
Foxf1Q61080 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC16.83■□□□□ 0.28
Foxf1Q61080 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Foxf1Q61080 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Foxf1Q61080 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Foxf1Q61080 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Foxf1Q61080 Gm14117-201ENSMUST00000122417 843 ntBASIC16.82■□□□□ 0.28
Foxf1Q61080 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Foxf1Q61080 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Foxf1Q61080 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Foxf1Q61080 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Foxf1Q61080 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Foxf1Q61080 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Foxf1Q61080 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Foxf1Q61080 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Foxf1Q61080 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Foxf1Q61080 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.81■□□□□ 0.28
Foxf1Q61080 Gm22238-201ENSMUST00000175222 88 ntBASIC16.81■□□□□ 0.28
Foxf1Q61080 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC16.81■□□□□ 0.28
Foxf1Q61080 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.81■□□□□ 0.28
Foxf1Q61080 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Foxf1Q61080 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Foxf1Q61080 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Foxf1Q61080 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Foxf1Q61080 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Foxf1Q61080 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Foxf1Q61080 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Foxf1Q61080 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Foxf1Q61080 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.8■□□□□ 0.28
Foxf1Q61080 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.8■□□□□ 0.28
Foxf1Q61080 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Foxf1Q61080 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Foxf1Q61080 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Foxf1Q61080 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Foxf1Q61080 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Foxf1Q61080 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Foxf1Q61080 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Foxf1Q61080 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Foxf1Q61080 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Foxf1Q61080 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Foxf1Q61080 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.79■□□□□ 0.28
Foxf1Q61080 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Foxf1Q61080 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Foxf1Q61080 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
Foxf1Q61080 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Foxf1Q61080 Gm9870-201ENSMUST00000063874 645 ntBASIC16.79■□□□□ 0.28
Foxf1Q61080 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Foxf1Q61080 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Foxf1Q61080 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Foxf1Q61080 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Foxf1Q61080 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Foxf1Q61080 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Foxf1Q61080 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Foxf1Q61080 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Foxf1Q61080 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Foxf1Q61080 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.78■□□□□ 0.28
Foxf1Q61080 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Foxf1Q61080 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.78■□□□□ 0.28
Foxf1Q61080 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Foxf1Q61080 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.78■□□□□ 0.28
Foxf1Q61080 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.78■□□□□ 0.28
Foxf1Q61080 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Foxf1Q61080 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Foxf1Q61080 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Foxf1Q61080 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Foxf1Q61080 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.77■□□□□ 0.28
Foxf1Q61080 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Foxf1Q61080 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Foxf1Q61080 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Foxf1Q61080 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.77■□□□□ 0.28
Foxf1Q61080 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Foxf1Q61080 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Foxf1Q61080 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Foxf1Q61080 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Foxf1Q61080 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Foxf1Q61080 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Foxf1Q61080 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.76■□□□□ 0.27
Foxf1Q61080 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.76■□□□□ 0.27
Foxf1Q61080 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Foxf1Q61080 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.76■□□□□ 0.27
Foxf1Q61080 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Foxf1Q61080 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.76■□□□□ 0.27
Foxf1Q61080 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Foxf1Q61080 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Foxf1Q61080 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Foxf1Q61080 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Foxf1Q61080 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Foxf1Q61080 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Foxf1Q61080 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Foxf1Q61080 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Foxf1Q61080 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Foxf1Q61080 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms