Protein–RNA interactions for Protein: Q60771

Cldn11, Claudin-11, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn11Q60771 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn11Q60771 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.9■□□□□ 0.94
Cldn11Q60771 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn11Q60771 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn11Q60771 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn11Q60771 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.9■□□□□ 0.94
Cldn11Q60771 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.9■□□□□ 0.94
Cldn11Q60771 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.9■□□□□ 0.94
Cldn11Q60771 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn11Q60771 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cldn11Q60771 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cldn11Q60771 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cldn11Q60771 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cldn11Q60771 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cldn11Q60771 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Cldn11Q60771 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Cldn11Q60771 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.89■□□□□ 0.93
Cldn11Q60771 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cldn11Q60771 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cldn11Q60771 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cldn11Q60771 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cldn11Q60771 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cldn11Q60771 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cldn11Q60771 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
Cldn11Q60771 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn11Q60771 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn11Q60771 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn11Q60771 Gm43173-201ENSMUST00000202246 593 ntBASIC20.88■□□□□ 0.93
Cldn11Q60771 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn11Q60771 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn11Q60771 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cldn11Q60771 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.88■□□□□ 0.93
Cldn11Q60771 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Cldn11Q60771 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cldn11Q60771 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.87■□□□□ 0.93
Cldn11Q60771 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.87■□□□□ 0.93
Cldn11Q60771 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Cldn11Q60771 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
Cldn11Q60771 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Cldn11Q60771 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cldn11Q60771 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cldn11Q60771 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Cldn11Q60771 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cldn11Q60771 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cldn11Q60771 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.86■□□□□ 0.93
Cldn11Q60771 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cldn11Q60771 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cldn11Q60771 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cldn11Q60771 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cldn11Q60771 Gm43017-201ENSMUST00000198296 752 ntBASIC20.85■□□□□ 0.93
Cldn11Q60771 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.85■□□□□ 0.93
Cldn11Q60771 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.85■□□□□ 0.93
Cldn11Q60771 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.85■□□□□ 0.93
Cldn11Q60771 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cldn11Q60771 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cldn11Q60771 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cldn11Q60771 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.84■□□□□ 0.93
Cldn11Q60771 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cldn11Q60771 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cldn11Q60771 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cldn11Q60771 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Cldn11Q60771 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cldn11Q60771 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Cldn11Q60771 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Cldn11Q60771 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cldn11Q60771 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cldn11Q60771 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cldn11Q60771 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.83■□□□□ 0.93
Cldn11Q60771 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cldn11Q60771 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.83■□□□□ 0.93
Cldn11Q60771 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.83■□□□□ 0.93
Cldn11Q60771 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Cldn11Q60771 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.83■□□□□ 0.93
Cldn11Q60771 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cldn11Q60771 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.83■□□□□ 0.93
Cldn11Q60771 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cldn11Q60771 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cldn11Q60771 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cldn11Q60771 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cldn11Q60771 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.82■□□□□ 0.92
Cldn11Q60771 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cldn11Q60771 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cldn11Q60771 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cldn11Q60771 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cldn11Q60771 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cldn11Q60771 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Cldn11Q60771 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cldn11Q60771 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.81■□□□□ 0.92
Cldn11Q60771 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cldn11Q60771 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cldn11Q60771 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.8■□□□□ 0.92
Cldn11Q60771 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.8■□□□□ 0.92
Cldn11Q60771 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cldn11Q60771 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cldn11Q60771 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cldn11Q60771 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
Cldn11Q60771 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cldn11Q60771 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
Cldn11Q60771 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
Cldn11Q60771 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms