Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav8d-2Q5R1B6 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav8d-2Q5R1B6 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.81■□□□□ 0.76
Trav8d-2Q5R1B6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav8d-2Q5R1B6 Mir6236-201ENSMUST00000184437 123 ntBASIC19.81■□□□□ 0.76
Trav8d-2Q5R1B6 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.81■□□□□ 0.76
Trav8d-2Q5R1B6 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav8d-2Q5R1B6 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav8d-2Q5R1B6 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav8d-2Q5R1B6 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav8d-2Q5R1B6 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav8d-2Q5R1B6 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav8d-2Q5R1B6 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav8d-2Q5R1B6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav8d-2Q5R1B6 Reep4-203ENSMUST00000226563 1444 ntBASIC19.8■□□□□ 0.76
Trav8d-2Q5R1B6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav8d-2Q5R1B6 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav8d-2Q5R1B6 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav8d-2Q5R1B6 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.8■□□□□ 0.76
Trav8d-2Q5R1B6 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trav8d-2Q5R1B6 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav8d-2Q5R1B6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav8d-2Q5R1B6 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Trav8d-2Q5R1B6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav8d-2Q5R1B6 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Trav8d-2Q5R1B6 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav8d-2Q5R1B6 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Trav8d-2Q5R1B6 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.79■□□□□ 0.76
Trav8d-2Q5R1B6 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trav8d-2Q5R1B6 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trav8d-2Q5R1B6 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav8d-2Q5R1B6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav8d-2Q5R1B6 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trav8d-2Q5R1B6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Trav8d-2Q5R1B6 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trav8d-2Q5R1B6 Nespas-201ENSMUST00000143738 1083 ntBASIC19.78■□□□□ 0.76
Trav8d-2Q5R1B6 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.78■□□□□ 0.76
Trav8d-2Q5R1B6 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.78■□□□□ 0.76
Trav8d-2Q5R1B6 Gm7514-201ENSMUST00000209475 934 ntBASIC19.78■□□□□ 0.76
Trav8d-2Q5R1B6 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav8d-2Q5R1B6 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav8d-2Q5R1B6 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Trav8d-2Q5R1B6 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav8d-2Q5R1B6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav8d-2Q5R1B6 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav8d-2Q5R1B6 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.77■□□□□ 0.76
Trav8d-2Q5R1B6 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Trav8d-2Q5R1B6 Gm12441-201ENSMUST00000121806 588 ntBASIC19.77■□□□□ 0.76
Trav8d-2Q5R1B6 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trav8d-2Q5R1B6 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.77■□□□□ 0.76
Trav8d-2Q5R1B6 Gm27801-201ENSMUST00000184174 223 ntBASIC19.77■□□□□ 0.76
Trav8d-2Q5R1B6 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav8d-2Q5R1B6 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Trav8d-2Q5R1B6 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav8d-2Q5R1B6 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav8d-2Q5R1B6 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav8d-2Q5R1B6 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav8d-2Q5R1B6 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trav8d-2Q5R1B6 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav8d-2Q5R1B6 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav8d-2Q5R1B6 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav8d-2Q5R1B6 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav8d-2Q5R1B6 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav8d-2Q5R1B6 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.76■□□□□ 0.75
Trav8d-2Q5R1B6 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
Trav8d-2Q5R1B6 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.76■□□□□ 0.75
Trav8d-2Q5R1B6 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav8d-2Q5R1B6 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trav8d-2Q5R1B6 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav8d-2Q5R1B6 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav8d-2Q5R1B6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav8d-2Q5R1B6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav8d-2Q5R1B6 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.75■□□□□ 0.75
Trav8d-2Q5R1B6 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav8d-2Q5R1B6 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav8d-2Q5R1B6 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.75■□□□□ 0.75
Trav8d-2Q5R1B6 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav8d-2Q5R1B6 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav8d-2Q5R1B6 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav8d-2Q5R1B6 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Trav8d-2Q5R1B6 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav8d-2Q5R1B6 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trav8d-2Q5R1B6 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Trav8d-2Q5R1B6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav8d-2Q5R1B6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav8d-2Q5R1B6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.73■□□□□ 0.75
Trav8d-2Q5R1B6 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav8d-2Q5R1B6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Trav8d-2Q5R1B6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav8d-2Q5R1B6 Mir5133-201ENSMUST00000174955 77 ntBASIC19.73■□□□□ 0.75
Trav8d-2Q5R1B6 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.73■□□□□ 0.75
Trav8d-2Q5R1B6 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav8d-2Q5R1B6 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.73■□□□□ 0.75
Trav8d-2Q5R1B6 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav8d-2Q5R1B6 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav8d-2Q5R1B6 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav8d-2Q5R1B6 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trav8d-2Q5R1B6 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trav8d-2Q5R1B6 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.72■□□□□ 0.75
Trav8d-2Q5R1B6 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms