Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Gm5921-201ENSMUST00000075898 882 ntBASIC19.33■□□□□ 0.68
Clhc1Q5M6W3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clhc1Q5M6W3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clhc1Q5M6W3 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clhc1Q5M6W3 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clhc1Q5M6W3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Clhc1Q5M6W3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clhc1Q5M6W3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clhc1Q5M6W3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Clhc1Q5M6W3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clhc1Q5M6W3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clhc1Q5M6W3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Clhc1Q5M6W3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clhc1Q5M6W3 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.32■□□□□ 0.68
Clhc1Q5M6W3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clhc1Q5M6W3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clhc1Q5M6W3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Clhc1Q5M6W3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clhc1Q5M6W3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.31■□□□□ 0.68
Clhc1Q5M6W3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.31■□□□□ 0.68
Clhc1Q5M6W3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Clhc1Q5M6W3 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clhc1Q5M6W3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clhc1Q5M6W3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clhc1Q5M6W3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clhc1Q5M6W3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clhc1Q5M6W3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clhc1Q5M6W3 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Clhc1Q5M6W3 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clhc1Q5M6W3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Clhc1Q5M6W3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clhc1Q5M6W3 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Clhc1Q5M6W3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Clhc1Q5M6W3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Clhc1Q5M6W3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clhc1Q5M6W3 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clhc1Q5M6W3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Clhc1Q5M6W3 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clhc1Q5M6W3 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clhc1Q5M6W3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Clhc1Q5M6W3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Clhc1Q5M6W3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clhc1Q5M6W3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Clhc1Q5M6W3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clhc1Q5M6W3 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Clhc1Q5M6W3 Gm45444-201ENSMUST00000211394 898 ntBASIC19.29■□□□□ 0.68
Clhc1Q5M6W3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clhc1Q5M6W3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clhc1Q5M6W3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clhc1Q5M6W3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clhc1Q5M6W3 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.29■□□□□ 0.68
Clhc1Q5M6W3 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clhc1Q5M6W3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clhc1Q5M6W3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Clhc1Q5M6W3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clhc1Q5M6W3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clhc1Q5M6W3 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clhc1Q5M6W3 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Clhc1Q5M6W3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clhc1Q5M6W3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clhc1Q5M6W3 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clhc1Q5M6W3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clhc1Q5M6W3 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clhc1Q5M6W3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.27■□□□□ 0.68
Clhc1Q5M6W3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Clhc1Q5M6W3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.27■□□□□ 0.68
Clhc1Q5M6W3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.27■□□□□ 0.68
Clhc1Q5M6W3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clhc1Q5M6W3 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Clhc1Q5M6W3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clhc1Q5M6W3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clhc1Q5M6W3 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clhc1Q5M6W3 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clhc1Q5M6W3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clhc1Q5M6W3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.26■□□□□ 0.67
Clhc1Q5M6W3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.26■□□□□ 0.67
Clhc1Q5M6W3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Clhc1Q5M6W3 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clhc1Q5M6W3 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clhc1Q5M6W3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clhc1Q5M6W3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clhc1Q5M6W3 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clhc1Q5M6W3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clhc1Q5M6W3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clhc1Q5M6W3 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clhc1Q5M6W3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Clhc1Q5M6W3 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clhc1Q5M6W3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.24■□□□□ 0.67
Clhc1Q5M6W3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clhc1Q5M6W3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clhc1Q5M6W3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clhc1Q5M6W3 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clhc1Q5M6W3 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clhc1Q5M6W3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clhc1Q5M6W3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clhc1Q5M6W3 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clhc1Q5M6W3 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clhc1Q5M6W3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clhc1Q5M6W3 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Clhc1Q5M6W3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms