Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn2bQ56A07 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Scn2bQ56A07 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn2bQ56A07 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Scn2bQ56A07 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Scn2bQ56A07 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn2bQ56A07 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn2bQ56A07 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn2bQ56A07 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn2bQ56A07 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.92■□□□□ 0.78
Scn2bQ56A07 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn2bQ56A07 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn2bQ56A07 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn2bQ56A07 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Scn2bQ56A07 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Scn2bQ56A07 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn2bQ56A07 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn2bQ56A07 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.91■□□□□ 0.78
Scn2bQ56A07 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn2bQ56A07 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn2bQ56A07 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn2bQ56A07 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn2bQ56A07 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scn2bQ56A07 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Scn2bQ56A07 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
Scn2bQ56A07 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn2bQ56A07 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn2bQ56A07 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn2bQ56A07 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn2bQ56A07 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn2bQ56A07 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scn2bQ56A07 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn2bQ56A07 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn2bQ56A07 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn2bQ56A07 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Scn2bQ56A07 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn2bQ56A07 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.89■□□□□ 0.77
Scn2bQ56A07 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.89■□□□□ 0.77
Scn2bQ56A07 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.89■□□□□ 0.77
Scn2bQ56A07 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn2bQ56A07 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn2bQ56A07 Rps24-207ENSMUST00000224568 714 ntBASIC19.88■□□□□ 0.77
Scn2bQ56A07 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Scn2bQ56A07 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Scn2bQ56A07 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn2bQ56A07 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.87■□□□□ 0.77
Scn2bQ56A07 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.87■□□□□ 0.77
Scn2bQ56A07 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn2bQ56A07 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn2bQ56A07 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Scn2bQ56A07 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn2bQ56A07 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Scn2bQ56A07 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.87■□□□□ 0.77
Scn2bQ56A07 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn2bQ56A07 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn2bQ56A07 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scn2bQ56A07 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scn2bQ56A07 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scn2bQ56A07 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn2bQ56A07 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn2bQ56A07 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Scn2bQ56A07 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.85■□□□□ 0.77
Scn2bQ56A07 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn2bQ56A07 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn2bQ56A07 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn2bQ56A07 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
Scn2bQ56A07 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn2bQ56A07 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn2bQ56A07 Etf1-202ENSMUST00000180351 108 ntBASIC19.85■□□□□ 0.77
Scn2bQ56A07 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.85■□□□□ 0.77
Scn2bQ56A07 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.85■□□□□ 0.77
Scn2bQ56A07 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn2bQ56A07 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn2bQ56A07 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn2bQ56A07 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn2bQ56A07 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn2bQ56A07 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn2bQ56A07 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Scn2bQ56A07 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.84■□□□□ 0.77
Scn2bQ56A07 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.84■□□□□ 0.77
Scn2bQ56A07 Gm10399-202ENSMUST00000202768 748 ntBASIC19.84■□□□□ 0.77
Scn2bQ56A07 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn2bQ56A07 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Scn2bQ56A07 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn2bQ56A07 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn2bQ56A07 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Scn2bQ56A07 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn2bQ56A07 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn2bQ56A07 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn2bQ56A07 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn2bQ56A07 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
Scn2bQ56A07 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Scn2bQ56A07 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Scn2bQ56A07 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scn2bQ56A07 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Scn2bQ56A07 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn2bQ56A07 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn2bQ56A07 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn2bQ56A07 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn2bQ56A07 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms