Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shisa3Q3UPR0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shisa3Q3UPR0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Shisa3Q3UPR0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Shisa3Q3UPR0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shisa3Q3UPR0 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Shisa3Q3UPR0 Gm13238-201ENSMUST00000117655 780 ntBASIC17.34■□□□□ 0.37
Shisa3Q3UPR0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Shisa3Q3UPR0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.34■□□□□ 0.37
Shisa3Q3UPR0 Gm45444-201ENSMUST00000211394 898 ntBASIC17.34■□□□□ 0.37
Shisa3Q3UPR0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Shisa3Q3UPR0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Shisa3Q3UPR0 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shisa3Q3UPR0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shisa3Q3UPR0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Shisa3Q3UPR0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.33■□□□□ 0.37
Shisa3Q3UPR0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Shisa3Q3UPR0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Shisa3Q3UPR0 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Shisa3Q3UPR0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Shisa3Q3UPR0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shisa3Q3UPR0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Shisa3Q3UPR0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shisa3Q3UPR0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shisa3Q3UPR0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shisa3Q3UPR0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.32■□□□□ 0.36
Shisa3Q3UPR0 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.32■□□□□ 0.36
Shisa3Q3UPR0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shisa3Q3UPR0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shisa3Q3UPR0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shisa3Q3UPR0 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Shisa3Q3UPR0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shisa3Q3UPR0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shisa3Q3UPR0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shisa3Q3UPR0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shisa3Q3UPR0 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shisa3Q3UPR0 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Shisa3Q3UPR0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shisa3Q3UPR0 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shisa3Q3UPR0 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shisa3Q3UPR0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shisa3Q3UPR0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shisa3Q3UPR0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shisa3Q3UPR0 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shisa3Q3UPR0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shisa3Q3UPR0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Shisa3Q3UPR0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shisa3Q3UPR0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.3■□□□□ 0.36
Shisa3Q3UPR0 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Shisa3Q3UPR0 Golph3-205ENSMUST00000228671 2842 ntBASIC17.3■□□□□ 0.36
Shisa3Q3UPR0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.3■□□□□ 0.36
Shisa3Q3UPR0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shisa3Q3UPR0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shisa3Q3UPR0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shisa3Q3UPR0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shisa3Q3UPR0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.29■□□□□ 0.36
Shisa3Q3UPR0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.29■□□□□ 0.36
Shisa3Q3UPR0 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shisa3Q3UPR0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Shisa3Q3UPR0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Shisa3Q3UPR0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.29■□□□□ 0.36
Shisa3Q3UPR0 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Shisa3Q3UPR0 Gm43566-201ENSMUST00000196851 808 ntBASIC17.29■□□□□ 0.36
Shisa3Q3UPR0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shisa3Q3UPR0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Shisa3Q3UPR0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.29■□□□□ 0.36
Shisa3Q3UPR0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Shisa3Q3UPR0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Shisa3Q3UPR0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Shisa3Q3UPR0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Shisa3Q3UPR0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Shisa3Q3UPR0 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shisa3Q3UPR0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shisa3Q3UPR0 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.28■□□□□ 0.36
Shisa3Q3UPR0 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shisa3Q3UPR0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Shisa3Q3UPR0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Shisa3Q3UPR0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Shisa3Q3UPR0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.27■□□□□ 0.36
Shisa3Q3UPR0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shisa3Q3UPR0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shisa3Q3UPR0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shisa3Q3UPR0 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shisa3Q3UPR0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shisa3Q3UPR0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.27■□□□□ 0.36
Shisa3Q3UPR0 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shisa3Q3UPR0 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Shisa3Q3UPR0 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shisa3Q3UPR0 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Shisa3Q3UPR0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Shisa3Q3UPR0 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Shisa3Q3UPR0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Shisa3Q3UPR0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Shisa3Q3UPR0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shisa3Q3UPR0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shisa3Q3UPR0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shisa3Q3UPR0 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shisa3Q3UPR0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Shisa3Q3UPR0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
Shisa3Q3UPR0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms