Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Nlrc4Q3UP24 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nlrc4Q3UP24 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nlrc4Q3UP24 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Nlrc4Q3UP24 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nlrc4Q3UP24 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nlrc4Q3UP24 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.23■□□□□ 0.99
Nlrc4Q3UP24 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nlrc4Q3UP24 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Nlrc4Q3UP24 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Nlrc4Q3UP24 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nlrc4Q3UP24 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nlrc4Q3UP24 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nlrc4Q3UP24 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nlrc4Q3UP24 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nlrc4Q3UP24 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.22■□□□□ 0.99
Nlrc4Q3UP24 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nlrc4Q3UP24 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nlrc4Q3UP24 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nlrc4Q3UP24 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nlrc4Q3UP24 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Nlrc4Q3UP24 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.22■□□□□ 0.99
Nlrc4Q3UP24 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nlrc4Q3UP24 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nlrc4Q3UP24 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nlrc4Q3UP24 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Nlrc4Q3UP24 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Nlrc4Q3UP24 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Nlrc4Q3UP24 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nlrc4Q3UP24 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.21■□□□□ 0.99
Nlrc4Q3UP24 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nlrc4Q3UP24 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.21■□□□□ 0.99
Nlrc4Q3UP24 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Nlrc4Q3UP24 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nlrc4Q3UP24 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nlrc4Q3UP24 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.21■□□□□ 0.99
Nlrc4Q3UP24 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nlrc4Q3UP24 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nlrc4Q3UP24 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Nlrc4Q3UP24 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nlrc4Q3UP24 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Nlrc4Q3UP24 Gm27454-201ENSMUST00000185090 204 ntBASIC21.2■□□□□ 0.98
Nlrc4Q3UP24 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Nlrc4Q3UP24 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nlrc4Q3UP24 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Nlrc4Q3UP24 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Nlrc4Q3UP24 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nlrc4Q3UP24 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nlrc4Q3UP24 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Nlrc4Q3UP24 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Nlrc4Q3UP24 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Nlrc4Q3UP24 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nlrc4Q3UP24 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Nlrc4Q3UP24 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
Nlrc4Q3UP24 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Nlrc4Q3UP24 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Nlrc4Q3UP24 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.18■□□□□ 0.98
Nlrc4Q3UP24 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.18■□□□□ 0.98
Nlrc4Q3UP24 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.18■□□□□ 0.98
Nlrc4Q3UP24 Gm43137-201ENSMUST00000198052 594 ntBASIC21.18■□□□□ 0.98
Nlrc4Q3UP24 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.18■□□□□ 0.98
Nlrc4Q3UP24 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Nlrc4Q3UP24 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Nlrc4Q3UP24 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Nlrc4Q3UP24 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Nlrc4Q3UP24 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.18■□□□□ 0.98
Nlrc4Q3UP24 Gm12821-201ENSMUST00000120022 600 ntBASIC21.17■□□□□ 0.98
Nlrc4Q3UP24 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Nlrc4Q3UP24 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.17■□□□□ 0.98
Nlrc4Q3UP24 Mir6236-201ENSMUST00000184437 123 ntBASIC21.17■□□□□ 0.98
Nlrc4Q3UP24 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nlrc4Q3UP24 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Nlrc4Q3UP24 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nlrc4Q3UP24 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Nlrc4Q3UP24 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Nlrc4Q3UP24 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Nlrc4Q3UP24 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nlrc4Q3UP24 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Nlrc4Q3UP24 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nlrc4Q3UP24 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nlrc4Q3UP24 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Nlrc4Q3UP24 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.16■□□□□ 0.98
Nlrc4Q3UP24 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.16■□□□□ 0.98
Nlrc4Q3UP24 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.16■□□□□ 0.98
Nlrc4Q3UP24 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nlrc4Q3UP24 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Nlrc4Q3UP24 Notumos-201ENSMUST00000151998 2659 ntBASIC21.15■□□□□ 0.98
Nlrc4Q3UP24 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.15■□□□□ 0.98
Nlrc4Q3UP24 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Nlrc4Q3UP24 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Nlrc4Q3UP24 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.15■□□□□ 0.98
Nlrc4Q3UP24 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Nlrc4Q3UP24 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Nlrc4Q3UP24 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.14■□□□□ 0.98
Nlrc4Q3UP24 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Nlrc4Q3UP24 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Nlrc4Q3UP24 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nlrc4Q3UP24 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nlrc4Q3UP24 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Nlrc4Q3UP24 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms