Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smcr8Q3UMB5 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smcr8Q3UMB5 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smcr8Q3UMB5 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.6■■□□□ 1.05
Smcr8Q3UMB5 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smcr8Q3UMB5 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.6■■□□□ 1.05
Smcr8Q3UMB5 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.6■■□□□ 1.05
Smcr8Q3UMB5 Gm43173-201ENSMUST00000202246 593 ntBASIC21.6■■□□□ 1.05
Smcr8Q3UMB5 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smcr8Q3UMB5 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.6■■□□□ 1.05
Smcr8Q3UMB5 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.6■■□□□ 1.05
Smcr8Q3UMB5 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smcr8Q3UMB5 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.6■■□□□ 1.05
Smcr8Q3UMB5 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Smcr8Q3UMB5 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Smcr8Q3UMB5 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Smcr8Q3UMB5 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smcr8Q3UMB5 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smcr8Q3UMB5 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smcr8Q3UMB5 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
Smcr8Q3UMB5 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Smcr8Q3UMB5 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Smcr8Q3UMB5 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Smcr8Q3UMB5 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Smcr8Q3UMB5 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Smcr8Q3UMB5 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smcr8Q3UMB5 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Smcr8Q3UMB5 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smcr8Q3UMB5 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smcr8Q3UMB5 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Smcr8Q3UMB5 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Smcr8Q3UMB5 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Smcr8Q3UMB5 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Smcr8Q3UMB5 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smcr8Q3UMB5 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smcr8Q3UMB5 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smcr8Q3UMB5 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smcr8Q3UMB5 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Smcr8Q3UMB5 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Smcr8Q3UMB5 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smcr8Q3UMB5 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.57■■□□□ 1.04
Smcr8Q3UMB5 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.57■■□□□ 1.04
Smcr8Q3UMB5 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.57■■□□□ 1.04
Smcr8Q3UMB5 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Smcr8Q3UMB5 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Smcr8Q3UMB5 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Smcr8Q3UMB5 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Smcr8Q3UMB5 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.57■■□□□ 1.04
Smcr8Q3UMB5 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Smcr8Q3UMB5 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Smcr8Q3UMB5 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smcr8Q3UMB5 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Smcr8Q3UMB5 Gm18284-201ENSMUST00000172604 624 ntBASIC21.56■■□□□ 1.04
Smcr8Q3UMB5 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.56■■□□□ 1.04
Smcr8Q3UMB5 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Smcr8Q3UMB5 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smcr8Q3UMB5 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Smcr8Q3UMB5 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
Smcr8Q3UMB5 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Smcr8Q3UMB5 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smcr8Q3UMB5 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Smcr8Q3UMB5 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smcr8Q3UMB5 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.55■■□□□ 1.04
Smcr8Q3UMB5 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smcr8Q3UMB5 Spcs1-204ENSMUST00000226782 949 ntBASIC21.55■■□□□ 1.04
Smcr8Q3UMB5 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smcr8Q3UMB5 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Smcr8Q3UMB5 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Smcr8Q3UMB5 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smcr8Q3UMB5 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smcr8Q3UMB5 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Smcr8Q3UMB5 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smcr8Q3UMB5 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smcr8Q3UMB5 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Smcr8Q3UMB5 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Smcr8Q3UMB5 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smcr8Q3UMB5 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smcr8Q3UMB5 Gm8495-201ENSMUST00000188740 694 ntBASIC21.54■■□□□ 1.04
Smcr8Q3UMB5 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Smcr8Q3UMB5 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Smcr8Q3UMB5 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.53■■□□□ 1.04
Smcr8Q3UMB5 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
Smcr8Q3UMB5 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Smcr8Q3UMB5 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.53■■□□□ 1.04
Smcr8Q3UMB5 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smcr8Q3UMB5 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smcr8Q3UMB5 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Smcr8Q3UMB5 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Smcr8Q3UMB5 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.52■■□□□ 1.04
Smcr8Q3UMB5 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
Smcr8Q3UMB5 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.52■■□□□ 1.04
Smcr8Q3UMB5 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Smcr8Q3UMB5 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smcr8Q3UMB5 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smcr8Q3UMB5 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Smcr8Q3UMB5 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smcr8Q3UMB5 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Smcr8Q3UMB5 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
Smcr8Q3UMB5 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Smcr8Q3UMB5 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms