Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Limch1Q3UH68 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Limch1Q3UH68 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Limch1Q3UH68 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Limch1Q3UH68 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Limch1Q3UH68 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Limch1Q3UH68 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Limch1Q3UH68 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Limch1Q3UH68 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Limch1Q3UH68 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Limch1Q3UH68 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Limch1Q3UH68 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Limch1Q3UH68 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Limch1Q3UH68 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC23.66■■□□□ 1.38
Limch1Q3UH68 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Limch1Q3UH68 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Limch1Q3UH68 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Limch1Q3UH68 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Limch1Q3UH68 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
Limch1Q3UH68 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Limch1Q3UH68 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Limch1Q3UH68 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Limch1Q3UH68 Gm45417-201ENSMUST00000209533 758 ntBASIC23.65■■□□□ 1.38
Limch1Q3UH68 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Limch1Q3UH68 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Limch1Q3UH68 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Limch1Q3UH68 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Limch1Q3UH68 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Limch1Q3UH68 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Limch1Q3UH68 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Limch1Q3UH68 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC23.64■■□□□ 1.37
Limch1Q3UH68 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
Limch1Q3UH68 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Limch1Q3UH68 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Limch1Q3UH68 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Limch1Q3UH68 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
Limch1Q3UH68 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC23.63■■□□□ 1.37
Limch1Q3UH68 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Limch1Q3UH68 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC23.63■■□□□ 1.37
Limch1Q3UH68 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC23.63■■□□□ 1.37
Limch1Q3UH68 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Limch1Q3UH68 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Limch1Q3UH68 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Limch1Q3UH68 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Limch1Q3UH68 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Limch1Q3UH68 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC23.62■■□□□ 1.37
Limch1Q3UH68 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Limch1Q3UH68 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Limch1Q3UH68 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Limch1Q3UH68 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC23.62■■□□□ 1.37
Limch1Q3UH68 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Limch1Q3UH68 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC23.62■■□□□ 1.37
Limch1Q3UH68 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Limch1Q3UH68 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Limch1Q3UH68 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC23.61■■□□□ 1.37
Limch1Q3UH68 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Limch1Q3UH68 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Limch1Q3UH68 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Limch1Q3UH68 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Limch1Q3UH68 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Limch1Q3UH68 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Limch1Q3UH68 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Limch1Q3UH68 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Limch1Q3UH68 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Limch1Q3UH68 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Limch1Q3UH68 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Limch1Q3UH68 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Limch1Q3UH68 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC23.59■■□□□ 1.37
Limch1Q3UH68 Gm7143-201ENSMUST00000222811 859 ntBASIC23.59■■□□□ 1.37
Limch1Q3UH68 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Limch1Q3UH68 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Limch1Q3UH68 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Limch1Q3UH68 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Limch1Q3UH68 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Limch1Q3UH68 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
Limch1Q3UH68 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Limch1Q3UH68 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC23.58■■□□□ 1.37
Limch1Q3UH68 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Limch1Q3UH68 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Limch1Q3UH68 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Limch1Q3UH68 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Limch1Q3UH68 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Limch1Q3UH68 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Limch1Q3UH68 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Limch1Q3UH68 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Limch1Q3UH68 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
Limch1Q3UH68 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Limch1Q3UH68 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Limch1Q3UH68 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Limch1Q3UH68 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Limch1Q3UH68 Gm37035-201ENSMUST00000194809 2148 ntBASIC23.57■■□□□ 1.36
Limch1Q3UH68 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Limch1Q3UH68 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Limch1Q3UH68 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC23.57■■□□□ 1.36
Limch1Q3UH68 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Limch1Q3UH68 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Limch1Q3UH68 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Limch1Q3UH68 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Limch1Q3UH68 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC23.56■■□□□ 1.36
Limch1Q3UH68 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 107.6 ms