Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q3U1D9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q3U1D9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q3U1D9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q3U1D9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q3U1D9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.49■□□□□ 0.39
Q3U1D9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q3U1D9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q3U1D9 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Q3U1D9 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.49■□□□□ 0.39
Q3U1D9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Q3U1D9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q3U1D9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Q3U1D9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q3U1D9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Q3U1D9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Q3U1D9 Gm26833-201ENSMUST00000180899 440 ntBASIC17.48■□□□□ 0.39
Q3U1D9 Mir6236-201ENSMUST00000184437 123 ntBASIC17.48■□□□□ 0.39
Q3U1D9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q3U1D9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Q3U1D9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q3U1D9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.47■□□□□ 0.39
Q3U1D9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Q3U1D9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Q3U1D9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q3U1D9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q3U1D9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.47■□□□□ 0.39
Q3U1D9 Gm18284-201ENSMUST00000172604 624 ntBASIC17.47■□□□□ 0.39
Q3U1D9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q3U1D9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.47■□□□□ 0.39
Q3U1D9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q3U1D9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Q3U1D9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Q3U1D9 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.47■□□□□ 0.39
Q3U1D9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q3U1D9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q3U1D9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q3U1D9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.46■□□□□ 0.39
Q3U1D9 Gm8495-201ENSMUST00000188740 694 ntBASIC17.46■□□□□ 0.39
Q3U1D9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Q3U1D9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q3U1D9 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q3U1D9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q3U1D9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q3U1D9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q3U1D9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Q3U1D9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Q3U1D9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q3U1D9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q3U1D9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q3U1D9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Q3U1D9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.45■□□□□ 0.38
Q3U1D9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.45■□□□□ 0.38
Q3U1D9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q3U1D9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q3U1D9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.45■□□□□ 0.38
Q3U1D9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Q3U1D9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Q3U1D9 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q3U1D9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.45■□□□□ 0.38
Q3U1D9 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Q3U1D9 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q3U1D9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Q3U1D9 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.45■□□□□ 0.38
Q3U1D9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Q3U1D9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Q3U1D9 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.44■□□□□ 0.38
Q3U1D9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.44■□□□□ 0.38
Q3U1D9 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.44■□□□□ 0.38
Q3U1D9 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Q3U1D9 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Q3U1D9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Q3U1D9 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Q3U1D9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Q3U1D9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Q3U1D9 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Q3U1D9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Q3U1D9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Q3U1D9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.43■□□□□ 0.38
Q3U1D9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Q3U1D9 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Q3U1D9 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Q3U1D9 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Q3U1D9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Q3U1D9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.42■□□□□ 0.38
Q3U1D9 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Q3U1D9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Q3U1D9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.42■□□□□ 0.38
Q3U1D9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Q3U1D9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.42■□□□□ 0.38
Q3U1D9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Q3U1D9 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Q3U1D9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Q3U1D9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Q3U1D9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q3U1D9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.41■□□□□ 0.38
Q3U1D9 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Q3U1D9 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
Q3U1D9 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Q3U1D9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms