Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.06■□□□□ 0.64
Khdc4Q3TCX3 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Khdc4Q3TCX3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Khdc4Q3TCX3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Khdc4Q3TCX3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Khdc4Q3TCX3 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Khdc4Q3TCX3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Khdc4Q3TCX3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Khdc4Q3TCX3 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
Khdc4Q3TCX3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.05■□□□□ 0.64
Khdc4Q3TCX3 Mir7075-201ENSMUST00000184187 82 ntBASIC19.05■□□□□ 0.64
Khdc4Q3TCX3 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.05■□□□□ 0.64
Khdc4Q3TCX3 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Khdc4Q3TCX3 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Khdc4Q3TCX3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Khdc4Q3TCX3 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.05■□□□□ 0.64
Khdc4Q3TCX3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Khdc4Q3TCX3 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Khdc4Q3TCX3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Khdc4Q3TCX3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Khdc4Q3TCX3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Khdc4Q3TCX3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Khdc4Q3TCX3 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Khdc4Q3TCX3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Khdc4Q3TCX3 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.03■□□□□ 0.64
Khdc4Q3TCX3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.03■□□□□ 0.64
Khdc4Q3TCX3 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Khdc4Q3TCX3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Khdc4Q3TCX3 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Khdc4Q3TCX3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Khdc4Q3TCX3 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Khdc4Q3TCX3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Khdc4Q3TCX3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Khdc4Q3TCX3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.64
Khdc4Q3TCX3 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Khdc4Q3TCX3 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Khdc4Q3TCX3 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.02■□□□□ 0.64
Khdc4Q3TCX3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Khdc4Q3TCX3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Khdc4Q3TCX3 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Khdc4Q3TCX3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Khdc4Q3TCX3 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Khdc4Q3TCX3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Khdc4Q3TCX3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Khdc4Q3TCX3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Khdc4Q3TCX3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
Khdc4Q3TCX3 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Khdc4Q3TCX3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Khdc4Q3TCX3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Khdc4Q3TCX3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Khdc4Q3TCX3 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Khdc4Q3TCX3 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Khdc4Q3TCX3 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19■□□□□ 0.63
Khdc4Q3TCX3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Khdc4Q3TCX3 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Khdc4Q3TCX3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19■□□□□ 0.63
Khdc4Q3TCX3 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Khdc4Q3TCX3 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Khdc4Q3TCX3 Gm2011-201ENSMUST00000203124 1263 ntBASIC19■□□□□ 0.63
Khdc4Q3TCX3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Khdc4Q3TCX3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19■□□□□ 0.63
Khdc4Q3TCX3 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Khdc4Q3TCX3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Khdc4Q3TCX3 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Khdc4Q3TCX3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Khdc4Q3TCX3 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Khdc4Q3TCX3 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Khdc4Q3TCX3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Khdc4Q3TCX3 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Khdc4Q3TCX3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.99■□□□□ 0.63
Khdc4Q3TCX3 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.99■□□□□ 0.63
Khdc4Q3TCX3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.99■□□□□ 0.63
Khdc4Q3TCX3 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.99■□□□□ 0.63
Khdc4Q3TCX3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Khdc4Q3TCX3 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Khdc4Q3TCX3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Khdc4Q3TCX3 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Khdc4Q3TCX3 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Khdc4Q3TCX3 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Khdc4Q3TCX3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Khdc4Q3TCX3 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Khdc4Q3TCX3 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Khdc4Q3TCX3 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Khdc4Q3TCX3 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Khdc4Q3TCX3 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Khdc4Q3TCX3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Khdc4Q3TCX3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Khdc4Q3TCX3 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Khdc4Q3TCX3 Gm43017-201ENSMUST00000198296 752 ntBASIC18.98■□□□□ 0.63
Khdc4Q3TCX3 Gm7143-201ENSMUST00000222811 859 ntBASIC18.98■□□□□ 0.63
Khdc4Q3TCX3 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Khdc4Q3TCX3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Khdc4Q3TCX3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Khdc4Q3TCX3 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.97■□□□□ 0.63
Khdc4Q3TCX3 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Khdc4Q3TCX3 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Khdc4Q3TCX3 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Khdc4Q3TCX3 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Khdc4Q3TCX3 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Khdc4Q3TCX3 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms