Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC11.13□□□□□ -0.63
Ush2AQ2QI47 Gm6365-201ENSMUST00000054711 744 ntBASIC11.13□□□□□ -0.63
Ush2AQ2QI47 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ush2AQ2QI47 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Ush2AQ2QI47 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ush2AQ2QI47 Gm20472-201ENSMUST00000174403 1240 ntBASIC11.12□□□□□ -0.63
Ush2AQ2QI47 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ush2AQ2QI47 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ush2AQ2QI47 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC11.12□□□□□ -0.63
Ush2AQ2QI47 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ush2AQ2QI47 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ush2AQ2QI47 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ush2AQ2QI47 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ush2AQ2QI47 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ush2AQ2QI47 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ush2AQ2QI47 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ush2AQ2QI47 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ush2AQ2QI47 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ush2AQ2QI47 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Ush2AQ2QI47 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ush2AQ2QI47 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Ush2AQ2QI47 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Ush2AQ2QI47 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ush2AQ2QI47 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC11.11□□□□□ -0.63
Ush2AQ2QI47 Gm5867-201ENSMUST00000063197 592 ntBASIC11.11□□□□□ -0.63
Ush2AQ2QI47 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ush2AQ2QI47 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ush2AQ2QI47 Gm43530-201ENSMUST00000195920 274 ntBASIC11.11□□□□□ -0.63
Ush2AQ2QI47 Gm43799-201ENSMUST00000201845 579 ntBASIC11.11□□□□□ -0.63
Ush2AQ2QI47 Arhgef33-211ENSMUST00000225658 473 ntBASIC11.11□□□□□ -0.63
Ush2AQ2QI47 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ush2AQ2QI47 Gm37055-201ENSMUST00000191866 133 ntBASIC11.11□□□□□ -0.63
Ush2AQ2QI47 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Ush2AQ2QI47 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC11.11□□□□□ -0.63
Ush2AQ2QI47 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC11.11□□□□□ -0.63
Ush2AQ2QI47 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ush2AQ2QI47 Gm26524-201ENSMUST00000192339 390 ntBASIC11.11□□□□□ -0.63
Ush2AQ2QI47 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ush2AQ2QI47 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ush2AQ2QI47 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ush2AQ2QI47 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ush2AQ2QI47 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ush2AQ2QI47 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ush2AQ2QI47 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC11.1□□□□□ -0.63
Ush2AQ2QI47 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC11.1□□□□□ -0.63
Ush2AQ2QI47 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ush2AQ2QI47 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ush2AQ2QI47 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ush2AQ2QI47 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ush2AQ2QI47 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ush2AQ2QI47 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC11.09□□□□□ -0.63
Ush2AQ2QI47 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ush2AQ2QI47 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Ush2AQ2QI47 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Ush2AQ2QI47 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Ush2AQ2QI47 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ush2AQ2QI47 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC11.08□□□□□ -0.63
Ush2AQ2QI47 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC11.08□□□□□ -0.63
Ush2AQ2QI47 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ush2AQ2QI47 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC11.08□□□□□ -0.64
Ush2AQ2QI47 AC153881.1-201ENSMUST00000214448 284 ntBASIC11.08□□□□□ -0.64
Ush2AQ2QI47 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ush2AQ2QI47 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Ush2AQ2QI47 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ush2AQ2QI47 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC11.08□□□□□ -0.64
Ush2AQ2QI47 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC11.08□□□□□ -0.64
Ush2AQ2QI47 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ush2AQ2QI47 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Ush2AQ2QI47 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Ush2AQ2QI47 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ush2AQ2QI47 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ush2AQ2QI47 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Ush2AQ2QI47 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ush2AQ2QI47 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ush2AQ2QI47 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ush2AQ2QI47 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ush2AQ2QI47 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ush2AQ2QI47 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ush2AQ2QI47 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ush2AQ2QI47 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC11.07□□□□□ -0.64
Ush2AQ2QI47 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ush2AQ2QI47 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Ush2AQ2QI47 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Ush2AQ2QI47 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ush2AQ2QI47 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ush2AQ2QI47 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ush2AQ2QI47 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Ush2AQ2QI47 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ush2AQ2QI47 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ush2AQ2QI47 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Ush2AQ2QI47 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ush2AQ2QI47 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ush2AQ2QI47 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Ush2AQ2QI47 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Ush2AQ2QI47 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ush2AQ2QI47 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ush2AQ2QI47 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Ush2AQ2QI47 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ush2AQ2QI47 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC11.05□□□□□ -0.64
Ush2AQ2QI47 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms