Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.46■□□□□ 0.55
Chd8Q09XV5 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Chd8Q09XV5 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chd8Q09XV5 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Chd8Q09XV5 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chd8Q09XV5 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.46■□□□□ 0.55
Chd8Q09XV5 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Chd8Q09XV5 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.46■□□□□ 0.54
Chd8Q09XV5 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chd8Q09XV5 Gm6211-202ENSMUST00000167849 925 ntBASIC18.45■□□□□ 0.54
Chd8Q09XV5 Gm6420-201ENSMUST00000193885 723 ntBASIC18.45■□□□□ 0.54
Chd8Q09XV5 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chd8Q09XV5 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chd8Q09XV5 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Chd8Q09XV5 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Chd8Q09XV5 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.44■□□□□ 0.54
Chd8Q09XV5 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Chd8Q09XV5 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.44■□□□□ 0.54
Chd8Q09XV5 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chd8Q09XV5 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.44■□□□□ 0.54
Chd8Q09XV5 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Chd8Q09XV5 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.43■□□□□ 0.54
Chd8Q09XV5 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.43■□□□□ 0.54
Chd8Q09XV5 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Chd8Q09XV5 Gm43799-201ENSMUST00000201845 579 ntBASIC18.43■□□□□ 0.54
Chd8Q09XV5 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chd8Q09XV5 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chd8Q09XV5 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chd8Q09XV5 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chd8Q09XV5 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.43■□□□□ 0.54
Chd8Q09XV5 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.43■□□□□ 0.54
Chd8Q09XV5 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.43■□□□□ 0.54
Chd8Q09XV5 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.43■□□□□ 0.54
Chd8Q09XV5 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chd8Q09XV5 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.42■□□□□ 0.54
Chd8Q09XV5 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.42■□□□□ 0.54
Chd8Q09XV5 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Chd8Q09XV5 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chd8Q09XV5 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chd8Q09XV5 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chd8Q09XV5 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.42■□□□□ 0.54
Chd8Q09XV5 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chd8Q09XV5 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Chd8Q09XV5 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.41■□□□□ 0.54
Chd8Q09XV5 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Chd8Q09XV5 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.41■□□□□ 0.54
Chd8Q09XV5 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Chd8Q09XV5 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Chd8Q09XV5 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chd8Q09XV5 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chd8Q09XV5 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Chd8Q09XV5 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chd8Q09XV5 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Chd8Q09XV5 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chd8Q09XV5 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chd8Q09XV5 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chd8Q09XV5 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chd8Q09XV5 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.4■□□□□ 0.54
Chd8Q09XV5 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Chd8Q09XV5 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Chd8Q09XV5 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chd8Q09XV5 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.54
Chd8Q09XV5 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Chd8Q09XV5 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Chd8Q09XV5 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Chd8Q09XV5 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Chd8Q09XV5 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chd8Q09XV5 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Chd8Q09XV5 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chd8Q09XV5 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Chd8Q09XV5 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.39■□□□□ 0.53
Chd8Q09XV5 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chd8Q09XV5 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chd8Q09XV5 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chd8Q09XV5 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chd8Q09XV5 Gm27275-201ENSMUST00000184318 272 ntBASIC18.38■□□□□ 0.53
Chd8Q09XV5 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Chd8Q09XV5 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.38■□□□□ 0.53
Chd8Q09XV5 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Chd8Q09XV5 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.38■□□□□ 0.53
Chd8Q09XV5 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.38■□□□□ 0.53
Chd8Q09XV5 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Chd8Q09XV5 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.37■□□□□ 0.53
Chd8Q09XV5 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chd8Q09XV5 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chd8Q09XV5 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.37■□□□□ 0.53
Chd8Q09XV5 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chd8Q09XV5 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chd8Q09XV5 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Chd8Q09XV5 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Chd8Q09XV5 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.37■□□□□ 0.53
Chd8Q09XV5 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd8Q09XV5 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd8Q09XV5 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Chd8Q09XV5 Gm6659-201ENSMUST00000174752 547 ntBASIC18.36■□□□□ 0.53
Chd8Q09XV5 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd8Q09XV5 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.36■□□□□ 0.53
Chd8Q09XV5 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Chd8Q09XV5 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Chd8Q09XV5 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms