Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tff1Q08423 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Tff1Q08423 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tff1Q08423 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tff1Q08423 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tff1Q08423 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tff1Q08423 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tff1Q08423 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tff1Q08423 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tff1Q08423 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tff1Q08423 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tff1Q08423 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tff1Q08423 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Tff1Q08423 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tff1Q08423 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tff1Q08423 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tff1Q08423 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tff1Q08423 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tff1Q08423 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tff1Q08423 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tff1Q08423 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.62■□□□□ 0.25
Tff1Q08423 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.62■□□□□ 0.25
Tff1Q08423 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tff1Q08423 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tff1Q08423 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Tff1Q08423 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Tff1Q08423 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tff1Q08423 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tff1Q08423 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.61■□□□□ 0.25
Tff1Q08423 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.61■□□□□ 0.25
Tff1Q08423 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC16.61■□□□□ 0.25
Tff1Q08423 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tff1Q08423 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.61■□□□□ 0.25
Tff1Q08423 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tff1Q08423 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tff1Q08423 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tff1Q08423 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tff1Q08423 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.6■□□□□ 0.25
Tff1Q08423 Gm7417-201ENSMUST00000192950 473 ntBASIC16.6■□□□□ 0.25
Tff1Q08423 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tff1Q08423 Serp2-204ENSMUST00000228055 705 ntBASIC16.6■□□□□ 0.25
Tff1Q08423 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Tff1Q08423 Golph3-202ENSMUST00000226517 2359 ntBASIC16.6■□□□□ 0.25
Tff1Q08423 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tff1Q08423 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tff1Q08423 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Tff1Q08423 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tff1Q08423 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Tff1Q08423 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tff1Q08423 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Tff1Q08423 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tff1Q08423 Iqck-206ENSMUST00000208658 2891 ntBASIC16.59■□□□□ 0.25
Tff1Q08423 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.59■□□□□ 0.25
Tff1Q08423 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.59■□□□□ 0.25
Tff1Q08423 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tff1Q08423 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tff1Q08423 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.59■□□□□ 0.25
Tff1Q08423 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tff1Q08423 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Tff1Q08423 Gm13241-201ENSMUST00000094493 780 ntBASIC16.59■□□□□ 0.25
Tff1Q08423 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Tff1Q08423 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.59■□□□□ 0.25
Tff1Q08423 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tff1Q08423 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tff1Q08423 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tff1Q08423 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tff1Q08423 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.59■□□□□ 0.25
Tff1Q08423 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tff1Q08423 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tff1Q08423 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tff1Q08423 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tff1Q08423 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tff1Q08423 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.58■□□□□ 0.24
Tff1Q08423 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Tff1Q08423 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC16.58■□□□□ 0.24
Tff1Q08423 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.58■□□□□ 0.24
Tff1Q08423 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tff1Q08423 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tff1Q08423 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.58■□□□□ 0.24
Tff1Q08423 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tff1Q08423 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tff1Q08423 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tff1Q08423 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tff1Q08423 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC16.57■□□□□ 0.24
Tff1Q08423 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tff1Q08423 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tff1Q08423 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tff1Q08423 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Tff1Q08423 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Tff1Q08423 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tff1Q08423 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tff1Q08423 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tff1Q08423 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.56■□□□□ 0.24
Tff1Q08423 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.56■□□□□ 0.24
Tff1Q08423 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tff1Q08423 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.56■□□□□ 0.24
Tff1Q08423 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tff1Q08423 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Tff1Q08423 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Tff1Q08423 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms