Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Nkx3-1P97436 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.42■□□□□ 0.38
Nkx3-1P97436 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx3-1P97436 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.42■□□□□ 0.38
Nkx3-1P97436 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx3-1P97436 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx3-1P97436 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx3-1P97436 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Nkx3-1P97436 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx3-1P97436 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx3-1P97436 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx3-1P97436 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Nkx3-1P97436 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.41■□□□□ 0.38
Nkx3-1P97436 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.41■□□□□ 0.38
Nkx3-1P97436 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx3-1P97436 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
Nkx3-1P97436 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Nkx3-1P97436 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Nkx3-1P97436 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nkx3-1P97436 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Nkx3-1P97436 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Nkx3-1P97436 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.4■□□□□ 0.38
Nkx3-1P97436 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx3-1P97436 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx3-1P97436 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx3-1P97436 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx3-1P97436 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.4■□□□□ 0.38
Nkx3-1P97436 Smad6-203ENSMUST00000179458 273 ntBASIC17.4■□□□□ 0.38
Nkx3-1P97436 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.4■□□□□ 0.38
Nkx3-1P97436 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx3-1P97436 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Nkx3-1P97436 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Nkx3-1P97436 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx3-1P97436 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nkx3-1P97436 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Nkx3-1P97436 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Nkx3-1P97436 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx3-1P97436 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx3-1P97436 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.39■□□□□ 0.37
Nkx3-1P97436 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Nkx3-1P97436 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx3-1P97436 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx3-1P97436 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx3-1P97436 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nkx3-1P97436 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.39■□□□□ 0.37
Nkx3-1P97436 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.38■□□□□ 0.37
Nkx3-1P97436 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx3-1P97436 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.38■□□□□ 0.37
Nkx3-1P97436 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Nkx3-1P97436 Gm7291-201ENSMUST00000199147 382 ntBASIC17.38■□□□□ 0.37
Nkx3-1P97436 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx3-1P97436 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx3-1P97436 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.38■□□□□ 0.37
Nkx3-1P97436 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx3-1P97436 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nkx3-1P97436 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx3-1P97436 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx3-1P97436 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx3-1P97436 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx3-1P97436 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx3-1P97436 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.37■□□□□ 0.37
Nkx3-1P97436 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.37■□□□□ 0.37
Nkx3-1P97436 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.37■□□□□ 0.37
Nkx3-1P97436 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Nkx3-1P97436 Gm26571-201ENSMUST00000181399 666 ntBASIC17.37■□□□□ 0.37
Nkx3-1P97436 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.37■□□□□ 0.37
Nkx3-1P97436 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.37■□□□□ 0.37
Nkx3-1P97436 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.37■□□□□ 0.37
Nkx3-1P97436 Gm42569-201ENSMUST00000200539 472 ntBASIC17.37■□□□□ 0.37
Nkx3-1P97436 Gm42642-201ENSMUST00000200683 355 ntBASIC17.37■□□□□ 0.37
Nkx3-1P97436 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx3-1P97436 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.37■□□□□ 0.37
Nkx3-1P97436 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx3-1P97436 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx3-1P97436 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx3-1P97436 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx3-1P97436 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx3-1P97436 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.36■□□□□ 0.37
Nkx3-1P97436 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx3-1P97436 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx3-1P97436 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx3-1P97436 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx3-1P97436 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx3-1P97436 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx3-1P97436 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.36■□□□□ 0.37
Nkx3-1P97436 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx3-1P97436 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Nkx3-1P97436 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx3-1P97436 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx3-1P97436 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx3-1P97436 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx3-1P97436 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx3-1P97436 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Nkx3-1P97436 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx3-1P97436 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx3-1P97436 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx3-1P97436 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.35■□□□□ 0.37
Nkx3-1P97436 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.35■□□□□ 0.37
Nkx3-1P97436 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx3-1P97436 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms