Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim43bP86448 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim43bP86448 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim43bP86448 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.62■□□□□ 0.89
Trim43bP86448 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim43bP86448 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim43bP86448 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim43bP86448 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim43bP86448 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Trim43bP86448 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim43bP86448 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Trim43bP86448 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim43bP86448 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim43bP86448 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.61■□□□□ 0.89
Trim43bP86448 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.61■□□□□ 0.89
Trim43bP86448 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim43bP86448 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim43bP86448 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim43bP86448 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim43bP86448 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim43bP86448 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim43bP86448 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim43bP86448 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim43bP86448 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim43bP86448 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim43bP86448 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim43bP86448 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.6■□□□□ 0.89
Trim43bP86448 Gm40881-201ENSMUST00000223397 166 ntBASIC20.6■□□□□ 0.89
Trim43bP86448 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim43bP86448 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.6■□□□□ 0.89
Trim43bP86448 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim43bP86448 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim43bP86448 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.6■□□□□ 0.89
Trim43bP86448 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim43bP86448 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim43bP86448 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim43bP86448 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim43bP86448 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Trim43bP86448 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim43bP86448 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.59■□□□□ 0.89
Trim43bP86448 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim43bP86448 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim43bP86448 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.58■□□□□ 0.89
Trim43bP86448 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim43bP86448 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
Trim43bP86448 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim43bP86448 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Trim43bP86448 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim43bP86448 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.58■□□□□ 0.89
Trim43bP86448 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Trim43bP86448 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.58■□□□□ 0.89
Trim43bP86448 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.58■□□□□ 0.89
Trim43bP86448 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Trim43bP86448 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim43bP86448 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim43bP86448 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim43bP86448 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.57■□□□□ 0.88
Trim43bP86448 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim43bP86448 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.57■□□□□ 0.88
Trim43bP86448 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Trim43bP86448 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim43bP86448 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.57■□□□□ 0.88
Trim43bP86448 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.57■□□□□ 0.88
Trim43bP86448 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trim43bP86448 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim43bP86448 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim43bP86448 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim43bP86448 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim43bP86448 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim43bP86448 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim43bP86448 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim43bP86448 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim43bP86448 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Trim43bP86448 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim43bP86448 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Trim43bP86448 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim43bP86448 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim43bP86448 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Trim43bP86448 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim43bP86448 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim43bP86448 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Trim43bP86448 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.55■□□□□ 0.88
Trim43bP86448 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Trim43bP86448 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim43bP86448 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim43bP86448 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.54■□□□□ 0.88
Trim43bP86448 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim43bP86448 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.54■□□□□ 0.88
Trim43bP86448 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim43bP86448 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.54■□□□□ 0.88
Trim43bP86448 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim43bP86448 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim43bP86448 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim43bP86448 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Trim43bP86448 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim43bP86448 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim43bP86448 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.53■□□□□ 0.88
Trim43bP86448 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim43bP86448 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim43bP86448 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms