Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SgcbP82349 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SgcbP82349 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SgcbP82349 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SgcbP82349 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SgcbP82349 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SgcbP82349 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SgcbP82349 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.92■□□□□ 0.46
SgcbP82349 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.92■□□□□ 0.46
SgcbP82349 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.92■□□□□ 0.46
SgcbP82349 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SgcbP82349 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SgcbP82349 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SgcbP82349 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SgcbP82349 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SgcbP82349 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SgcbP82349 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SgcbP82349 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SgcbP82349 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SgcbP82349 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.91■□□□□ 0.46
SgcbP82349 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.91■□□□□ 0.46
SgcbP82349 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SgcbP82349 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SgcbP82349 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.91■□□□□ 0.46
SgcbP82349 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SgcbP82349 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SgcbP82349 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SgcbP82349 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.91■□□□□ 0.46
SgcbP82349 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SgcbP82349 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SgcbP82349 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SgcbP82349 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
SgcbP82349 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SgcbP82349 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SgcbP82349 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SgcbP82349 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SgcbP82349 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SgcbP82349 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SgcbP82349 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SgcbP82349 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SgcbP82349 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SgcbP82349 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
SgcbP82349 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SgcbP82349 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SgcbP82349 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.89■□□□□ 0.45
SgcbP82349 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SgcbP82349 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
SgcbP82349 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SgcbP82349 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SgcbP82349 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SgcbP82349 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SgcbP82349 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.88■□□□□ 0.45
SgcbP82349 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SgcbP82349 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.88■□□□□ 0.45
SgcbP82349 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SgcbP82349 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SgcbP82349 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SgcbP82349 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SgcbP82349 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SgcbP82349 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
SgcbP82349 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.87■□□□□ 0.45
SgcbP82349 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SgcbP82349 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SgcbP82349 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SgcbP82349 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SgcbP82349 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SgcbP82349 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SgcbP82349 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SgcbP82349 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SgcbP82349 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SgcbP82349 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SgcbP82349 Gm15039-201ENSMUST00000118914 875 ntBASIC17.86■□□□□ 0.45
SgcbP82349 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.86■□□□□ 0.45
SgcbP82349 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SgcbP82349 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.86■□□□□ 0.45
SgcbP82349 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SgcbP82349 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SgcbP82349 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SgcbP82349 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SgcbP82349 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SgcbP82349 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SgcbP82349 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
SgcbP82349 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SgcbP82349 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SgcbP82349 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.85■□□□□ 0.45
SgcbP82349 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.85■□□□□ 0.45
SgcbP82349 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SgcbP82349 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SgcbP82349 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SgcbP82349 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.84■□□□□ 0.45
SgcbP82349 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SgcbP82349 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SgcbP82349 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SgcbP82349 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SgcbP82349 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.84■□□□□ 0.45
SgcbP82349 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SgcbP82349 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.84■□□□□ 0.45
SgcbP82349 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.84■□□□□ 0.45
SgcbP82349 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SgcbP82349 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms