Protein–RNA interactions for Protein: P70658

Cxcr4, C-X-C chemokine receptor type 4, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr4P70658 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cxcr4P70658 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cxcr4P70658 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.85■□□□□ 0.61
Cxcr4P70658 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cxcr4P70658 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cxcr4P70658 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.85■□□□□ 0.61
Cxcr4P70658 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.85■□□□□ 0.61
Cxcr4P70658 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cxcr4P70658 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cxcr4P70658 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cxcr4P70658 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cxcr4P70658 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cxcr4P70658 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Cxcr4P70658 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cxcr4P70658 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.84■□□□□ 0.61
Cxcr4P70658 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cxcr4P70658 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cxcr4P70658 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cxcr4P70658 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cxcr4P70658 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cxcr4P70658 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Cxcr4P70658 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cxcr4P70658 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cxcr4P70658 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cxcr4P70658 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cxcr4P70658 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cxcr4P70658 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cxcr4P70658 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.83■□□□□ 0.6
Cxcr4P70658 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.83■□□□□ 0.6
Cxcr4P70658 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.83■□□□□ 0.6
Cxcr4P70658 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cxcr4P70658 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cxcr4P70658 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cxcr4P70658 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cxcr4P70658 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.83■□□□□ 0.6
Cxcr4P70658 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.82■□□□□ 0.6
Cxcr4P70658 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cxcr4P70658 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cxcr4P70658 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cxcr4P70658 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Cxcr4P70658 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cxcr4P70658 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cxcr4P70658 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cxcr4P70658 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cxcr4P70658 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cxcr4P70658 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Cxcr4P70658 Iqck-206ENSMUST00000208658 2891 ntBASIC18.81■□□□□ 0.6
Cxcr4P70658 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.81■□□□□ 0.6
Cxcr4P70658 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Cxcr4P70658 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.81■□□□□ 0.6
Cxcr4P70658 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.81■□□□□ 0.6
Cxcr4P70658 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cxcr4P70658 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cxcr4P70658 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Cxcr4P70658 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cxcr4P70658 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.8■□□□□ 0.6
Cxcr4P70658 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cxcr4P70658 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cxcr4P70658 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cxcr4P70658 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.8■□□□□ 0.6
Cxcr4P70658 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.8■□□□□ 0.6
Cxcr4P70658 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.8■□□□□ 0.6
Cxcr4P70658 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cxcr4P70658 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cxcr4P70658 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cxcr4P70658 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Cxcr4P70658 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cxcr4P70658 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cxcr4P70658 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cxcr4P70658 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cxcr4P70658 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cxcr4P70658 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cxcr4P70658 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.79■□□□□ 0.6
Cxcr4P70658 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.79■□□□□ 0.6
Cxcr4P70658 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cxcr4P70658 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cxcr4P70658 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Cxcr4P70658 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cxcr4P70658 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cxcr4P70658 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cxcr4P70658 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cxcr4P70658 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cxcr4P70658 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cxcr4P70658 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cxcr4P70658 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cxcr4P70658 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cxcr4P70658 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cxcr4P70658 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cxcr4P70658 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cxcr4P70658 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cxcr4P70658 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cxcr4P70658 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cxcr4P70658 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cxcr4P70658 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cxcr4P70658 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cxcr4P70658 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cxcr4P70658 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.77■□□□□ 0.6
Cxcr4P70658 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cxcr4P70658 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Cxcr4P70658 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms