Protein–RNA interactions for Protein: P70348

Gcm1, Chorion-specific transcription factor GCMa, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gcm1P70348 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gcm1P70348 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gcm1P70348 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gcm1P70348 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gcm1P70348 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gcm1P70348 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.81■□□□□ 0.28
Gcm1P70348 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gcm1P70348 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Gcm1P70348 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gcm1P70348 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gcm1P70348 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gcm1P70348 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.8■□□□□ 0.28
Gcm1P70348 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gcm1P70348 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Gcm1P70348 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gcm1P70348 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Gcm1P70348 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Gcm1P70348 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.8■□□□□ 0.28
Gcm1P70348 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gcm1P70348 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gcm1P70348 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gcm1P70348 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gcm1P70348 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gcm1P70348 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Gcm1P70348 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gcm1P70348 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gcm1P70348 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Gcm1P70348 Gm43530-201ENSMUST00000195920 274 ntBASIC16.79■□□□□ 0.28
Gcm1P70348 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Gcm1P70348 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gcm1P70348 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gcm1P70348 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gcm1P70348 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gcm1P70348 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gcm1P70348 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gcm1P70348 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gcm1P70348 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Gcm1P70348 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.78■□□□□ 0.28
Gcm1P70348 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gcm1P70348 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gcm1P70348 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gcm1P70348 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gcm1P70348 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.77■□□□□ 0.28
Gcm1P70348 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gcm1P70348 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gcm1P70348 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gcm1P70348 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gcm1P70348 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gcm1P70348 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Gcm1P70348 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gcm1P70348 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gcm1P70348 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.77■□□□□ 0.27
Gcm1P70348 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.77■□□□□ 0.27
Gcm1P70348 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gcm1P70348 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Gcm1P70348 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gcm1P70348 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.76■□□□□ 0.27
Gcm1P70348 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Gcm1P70348 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gcm1P70348 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gcm1P70348 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.76■□□□□ 0.27
Gcm1P70348 Gm43137-201ENSMUST00000198052 594 ntBASIC16.76■□□□□ 0.27
Gcm1P70348 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Gcm1P70348 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.76■□□□□ 0.27
Gcm1P70348 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.76■□□□□ 0.27
Gcm1P70348 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gcm1P70348 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gcm1P70348 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gcm1P70348 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.76■□□□□ 0.27
Gcm1P70348 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gcm1P70348 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Gcm1P70348 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Gcm1P70348 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gcm1P70348 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gcm1P70348 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Gcm1P70348 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.75■□□□□ 0.27
Gcm1P70348 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gcm1P70348 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Gcm1P70348 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gcm1P70348 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gcm1P70348 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.74■□□□□ 0.27
Gcm1P70348 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Gcm1P70348 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.74■□□□□ 0.27
Gcm1P70348 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.74■□□□□ 0.27
Gcm1P70348 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Gcm1P70348 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gcm1P70348 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gcm1P70348 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Gcm1P70348 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Gcm1P70348 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gcm1P70348 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gcm1P70348 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Gcm1P70348 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.73■□□□□ 0.27
Gcm1P70348 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gcm1P70348 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Gcm1P70348 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gcm1P70348 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Gcm1P70348 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gcm1P70348 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gcm1P70348 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms