Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Crnkl1P63154 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Crnkl1P63154 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Crnkl1P63154 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Crnkl1P63154 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Crnkl1P63154 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Crnkl1P63154 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Crnkl1P63154 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Crnkl1P63154 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.78■□□□□ 0.76
Crnkl1P63154 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Crnkl1P63154 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Crnkl1P63154 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Crnkl1P63154 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Crnkl1P63154 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Crnkl1P63154 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Crnkl1P63154 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Crnkl1P63154 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Crnkl1P63154 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Crnkl1P63154 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Crnkl1P63154 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Crnkl1P63154 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Crnkl1P63154 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Crnkl1P63154 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Crnkl1P63154 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Crnkl1P63154 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Crnkl1P63154 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Crnkl1P63154 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Crnkl1P63154 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Crnkl1P63154 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Crnkl1P63154 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Crnkl1P63154 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Crnkl1P63154 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Crnkl1P63154 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Crnkl1P63154 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Crnkl1P63154 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Crnkl1P63154 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Crnkl1P63154 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Crnkl1P63154 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Crnkl1P63154 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Crnkl1P63154 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Crnkl1P63154 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Crnkl1P63154 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Crnkl1P63154 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Crnkl1P63154 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Crnkl1P63154 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Crnkl1P63154 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Crnkl1P63154 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Crnkl1P63154 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Crnkl1P63154 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.74■□□□□ 0.75
Crnkl1P63154 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Crnkl1P63154 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Crnkl1P63154 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Crnkl1P63154 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Crnkl1P63154 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Crnkl1P63154 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Crnkl1P63154 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Crnkl1P63154 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Crnkl1P63154 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Crnkl1P63154 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Crnkl1P63154 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Crnkl1P63154 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.73■□□□□ 0.75
Crnkl1P63154 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Crnkl1P63154 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Crnkl1P63154 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Crnkl1P63154 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.72■□□□□ 0.75
Crnkl1P63154 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Crnkl1P63154 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Crnkl1P63154 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Crnkl1P63154 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Crnkl1P63154 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Crnkl1P63154 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Crnkl1P63154 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Crnkl1P63154 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Crnkl1P63154 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Crnkl1P63154 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Crnkl1P63154 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Crnkl1P63154 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Crnkl1P63154 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Crnkl1P63154 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Crnkl1P63154 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.7■□□□□ 0.74
Crnkl1P63154 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Crnkl1P63154 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Crnkl1P63154 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Crnkl1P63154 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Crnkl1P63154 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Crnkl1P63154 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.69■□□□□ 0.74
Crnkl1P63154 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Crnkl1P63154 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Crnkl1P63154 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Crnkl1P63154 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Crnkl1P63154 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.68■□□□□ 0.74
Crnkl1P63154 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Crnkl1P63154 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Crnkl1P63154 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Crnkl1P63154 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Crnkl1P63154 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Crnkl1P63154 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Crnkl1P63154 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Crnkl1P63154 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.68■□□□□ 0.74
Crnkl1P63154 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms