Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Gm8493-201ENSMUST00000196881 489 ntBASIC19.83■□□□□ 0.77
Lhx1P63006 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.83■□□□□ 0.77
Lhx1P63006 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lhx1P63006 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lhx1P63006 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lhx1P63006 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Lhx1P63006 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
Lhx1P63006 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Lhx1P63006 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Lhx1P63006 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lhx1P63006 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lhx1P63006 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lhx1P63006 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lhx1P63006 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lhx1P63006 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lhx1P63006 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.81■□□□□ 0.76
Lhx1P63006 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lhx1P63006 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lhx1P63006 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.81■□□□□ 0.76
Lhx1P63006 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lhx1P63006 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Lhx1P63006 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Lhx1P63006 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lhx1P63006 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Lhx1P63006 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Lhx1P63006 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Lhx1P63006 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lhx1P63006 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Lhx1P63006 Spcs1-204ENSMUST00000226782 949 ntBASIC19.8■□□□□ 0.76
Lhx1P63006 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lhx1P63006 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lhx1P63006 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lhx1P63006 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lhx1P63006 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lhx1P63006 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Lhx1P63006 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.79■□□□□ 0.76
Lhx1P63006 Serp2-204ENSMUST00000228055 705 ntBASIC19.79■□□□□ 0.76
Lhx1P63006 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lhx1P63006 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.79■□□□□ 0.76
Lhx1P63006 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Lhx1P63006 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Lhx1P63006 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Lhx1P63006 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.79■□□□□ 0.76
Lhx1P63006 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lhx1P63006 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lhx1P63006 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Lhx1P63006 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.79■□□□□ 0.76
Lhx1P63006 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lhx1P63006 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lhx1P63006 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lhx1P63006 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.78■□□□□ 0.76
Lhx1P63006 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Lhx1P63006 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lhx1P63006 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.78■□□□□ 0.76
Lhx1P63006 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lhx1P63006 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lhx1P63006 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lhx1P63006 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.78■□□□□ 0.76
Lhx1P63006 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lhx1P63006 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Lhx1P63006 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lhx1P63006 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lhx1P63006 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lhx1P63006 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.77■□□□□ 0.76
Lhx1P63006 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lhx1P63006 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lhx1P63006 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Lhx1P63006 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lhx1P63006 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.77■□□□□ 0.76
Lhx1P63006 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Lhx1P63006 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lhx1P63006 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lhx1P63006 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lhx1P63006 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lhx1P63006 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Lhx1P63006 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.77■□□□□ 0.76
Lhx1P63006 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lhx1P63006 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Lhx1P63006 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Lhx1P63006 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lhx1P63006 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Lhx1P63006 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lhx1P63006 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.76■□□□□ 0.75
Lhx1P63006 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.76■□□□□ 0.75
Lhx1P63006 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Lhx1P63006 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Lhx1P63006 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lhx1P63006 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.76■□□□□ 0.75
Lhx1P63006 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lhx1P63006 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lhx1P63006 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Lhx1P63006 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lhx1P63006 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Lhx1P63006 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Lhx1P63006 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lhx1P63006 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.76■□□□□ 0.75
Lhx1P63006 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lhx1P63006 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lhx1P63006 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Lhx1P63006 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms