Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rpl39P62892 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Rpl39P62892 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC14.32□□□□□ -0.12
Rpl39P62892 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rpl39P62892 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC14.32□□□□□ -0.12
Rpl39P62892 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl39P62892 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl39P62892 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC14.32□□□□□ -0.12
Rpl39P62892 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Rpl39P62892 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl39P62892 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl39P62892 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl39P62892 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl39P62892 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC14.31□□□□□ -0.12
Rpl39P62892 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC14.31□□□□□ -0.12
Rpl39P62892 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rpl39P62892 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC14.31□□□□□ -0.12
Rpl39P62892 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl39P62892 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Rpl39P62892 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl39P62892 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl39P62892 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl39P62892 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rpl39P62892 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl39P62892 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl39P62892 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl39P62892 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Rpl39P62892 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl39P62892 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC14.3□□□□□ -0.12
Rpl39P62892 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl39P62892 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl39P62892 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Rpl39P62892 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl39P62892 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl39P62892 Gm5112-201ENSMUST00000204407 2368 ntBASIC14.3□□□□□ -0.12
Rpl39P62892 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rpl39P62892 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl39P62892 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl39P62892 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl39P62892 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl39P62892 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl39P62892 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC14.29□□□□□ -0.12
Rpl39P62892 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl39P62892 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl39P62892 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl39P62892 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl39P62892 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl39P62892 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl39P62892 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl39P62892 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl39P62892 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl39P62892 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rpl39P62892 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rpl39P62892 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
Rpl39P62892 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl39P62892 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpl39P62892 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC14.28□□□□□ -0.12
Rpl39P62892 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rpl39P62892 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rpl39P62892 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC14.28□□□□□ -0.12
Rpl39P62892 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpl39P62892 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Rpl39P62892 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rpl39P62892 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rpl39P62892 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rpl39P62892 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rpl39P62892 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rpl39P62892 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.27□□□□□ -0.13
Rpl39P62892 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rpl39P62892 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC14.27□□□□□ -0.13
Rpl39P62892 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rpl39P62892 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Rpl39P62892 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rpl39P62892 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpl39P62892 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rpl39P62892 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Rpl39P62892 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rpl39P62892 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpl39P62892 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpl39P62892 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpl39P62892 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpl39P62892 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpl39P62892 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpl39P62892 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rpl39P62892 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpl39P62892 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpl39P62892 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC14.25□□□□□ -0.13
Rpl39P62892 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rpl39P62892 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpl39P62892 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Rpl39P62892 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpl39P62892 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpl39P62892 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Rpl39P62892 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpl39P62892 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rpl39P62892 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpl39P62892 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpl39P62892 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Rpl39P62892 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpl39P62892 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms